DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd19B and Foxp1

DIOPT Version :10

Sequence 1:NP_608369.1 Gene:fd19B / 33010 FlyBaseID:FBgn0031086 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_038963306.1 Gene:Foxp1 / 297480 RGDID:1308669 Length:733 Species:Rattus norvegicus


Alignment Length:264 Identity:65/264 - (24%)
Similarity:106/264 - (40%) Gaps:60/264 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TPIFQ--SSFSIRSLLSVDKKEESPISKHNSGSSFSSCSSSSSNSSSDSMAAKSNAKPAFTYSAL 66
            ||:.|  |..:..|:.:|     .||.:..| ..::...||:..:.:......:..:|.|||::|
  Rat   471 TPVTQGPSVITTTSMHTV-----GPIRRRYS-DKYNVPISSADIAQNQEFYKNAEVRPPFTYASL 529

  Fly    67 IVMAIWSSSEKRLTLSGICKWIADNFPYYRTRKSVWQNSIRHNLSLNPFFVRVPRALDDPGRGHY 131
            |..||..|.||:|||:.|..|....|.|:|...:.|:|::||||||:..||||...     :|..
  Rat   530 IRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENV-----KGAV 589

  Fly   132 WALDPYAEDLSIGETTGRLRRSNWQQNTGARPKVTGHPYQRMPYYGHGHGNGPYIKAHSAYFPIM 196
            |.:|         |...:.||..         |::|:| ..:.....||          ||...:
  Rat   590 WTVD---------EVEFQKRRPQ---------KISGNP-SLIKNMQSGH----------AYCTPL 625

  Fly   197 DHQHHAAMVQHYQAMMHRYQMMPHP-----------------HHHQHQHQHQHPHSHFIQQSKPL 244
            :....|:|.:: ...::....|.:|                 .|.........|....:|...|:
  Rat   626 NAALQASMAEN-SIPLYTTASMGNPTLGSLASAIREELNGAMEHTNSNESDSSPGRSPMQAVHPI 689

  Fly   245 HIQE 248
            |::|
  Rat   690 HVKE 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd19BNP_608369.1 Forkhead 58..140 CDD:459732 34/81 (42%)
Foxp1XP_038963306.1 FOXP-CC 358..425 CDD:465036
COG5025 493..>707 CDD:227358 57/237 (24%)
FH_FOXP2 520..601 CDD:410839 35/94 (37%)
Blue background indicates that the domain is not in the aligned region.

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