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Protein Alignment fd19B and pha-4
DIOPT Version :9
Sequence 1: | NP_608369.1 |
Gene: | fd19B / 33010 |
FlyBaseID: | FBgn0031086 |
Length: | 260 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001041114.1 |
Gene: | pha-4 / 180357 |
WormBaseID: | WBGene00004013 |
Length: | 506 |
Species: | Caenorhabditis elegans |
Alignment Length: | 186 |
Identity: | 57/186 - (30%) |
Similarity: | 89/186 - (47%) |
Gaps: | 29/186 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 SVDKKEESPISKHNSGSSFSSCSSSSSNSSSDSMA-----------------------AKSNAKP 59
||.....|.:...::|.|.|:.::|.::.|...:: ....:||
Worm 173 SVATSSASAVIGRSNGRSSSTVAASPADRSYSGVSGGQGQELTIQEFETVTEKIRRHGTYGQSKP 237
Fly 60 AFTYSALIVMAIWSSSEKRLTLSGICKWIADNFPYYRTRKSVWQNSIRHNLSLNPFFVRVPRALD 124
.::|.:||.|||..|:.::||||.|..||.|.||||:..:..|||||||:||.|..||:|.|:.|
Worm 238 PYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRHSLSFNDCFVKVARSPD 302
Fly 125 DPGRGHYWALDPYAEDL-SIGETTGRLRRSNWQQNTGARPKVTG-----HPYQRMP 174
.||:|.:|.|..:..:: ..|....|.:|...::...:|.|... |..|.:|
Worm 303 KPGKGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNANSQQLHQQQHIP 358
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
fd19B | NP_608369.1 |
FH |
58..135 |
CDD:238016 |
40/76 (53%) |
pha-4 | NP_001041114.1 |
FH |
236..324 |
CDD:214627 |
41/87 (47%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1270467at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000010 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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