DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd19B and pes-1

DIOPT Version :9

Sequence 1:NP_608369.1 Gene:fd19B / 33010 FlyBaseID:FBgn0031086 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001023406.1 Gene:pes-1 / 177267 WormBaseID:WBGene00003976 Length:264 Species:Caenorhabditis elegans


Alignment Length:272 Identity:79/272 - (29%)
Similarity:111/272 - (40%) Gaps:78/272 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FSIRSL-LSVDKKEE-----SPISKHNSGSSFSSCSSSSSNSSSDSMAAKSNAKPAFTYSALIVM 69
            |:|..| |.:|....     ||.|..::.|.......|..||...|.......:|.::|:|||.|
 Worm    40 FNISDLCLDLDSSTSSSCSVSPASSFHTRSESVGQQQSGRNSPVSSSTESPTKRPKYSYNALIAM 104

  Fly    70 AIWSSSEKRLTLSGICKWIADNFPYYRTRKSV-WQNSIRHNLSLNPFFVRVPRALDDPGRGHYWA 133
            ||.||..|.|.:|.|.|:|:.||.||:.:|.: ||||:||||||:..|.:| |.||  |:|.|||
 Worm   105 AIQSSPFKSLRVSEIYKYISSNFSYYKNQKPLQWQNSVRHNLSLHKEFRKV-RTLD--GKGSYWA 166

  Fly   134 LD-PYAEDLSIGETTGRLRRSNWQQNTGARPKVTGHPYQRMPYYGHGHGNGPYIKAHSAYFPIMD 197
            :. ....|:.|....|:|||.                                 |:..|.||   
 Worm   167 MTADLGTDVYISNNCGKLRRQ---------------------------------KSKVAKFP--- 195

  Fly   198 HQHHAAMVQHYQAMMHRYQMMPH-PHHHQHQHQHQHP-------HSHFIQQSKPLH--------- 245
                 .|.||:.        :|. |..:.||...|:|       .:.::|..:.|.         
 Worm   196 -----PMQQHFP--------IPQLPTQNIHQLCMQNPQILATLLQNMYLQNMQNLQNIPMVPGFP 247

  Fly   246 -IQEPYHHTRYH 256
             |..|.:.|.:|
 Worm   248 IIPVPINPTSFH 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd19BNP_608369.1 FH 58..135 CDD:238016 41/77 (53%)
pes-1NP_001023406.1 FH 93..168 CDD:238016 41/77 (53%)
rad23 <203..>240 CDD:273167 8/36 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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