DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd19B and Foxc1

DIOPT Version :9

Sequence 1:NP_608369.1 Gene:fd19B / 33010 FlyBaseID:FBgn0031086 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_032618.2 Gene:Foxc1 / 17300 MGIID:1347466 Length:553 Species:Mus musculus


Alignment Length:147 Identity:58/147 - (39%)
Similarity:76/147 - (51%) Gaps:18/147 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 KSNAKPAFTYSALIVMAIWSSSEKRLTLSGICKWIADNFPYYRTRKSVWQNSIRHNLSLNPFFVR 118
            |...||.::|.|||.|||.::.:|::||:||.::|.|.||:||..|..||||||||||||..||:
Mouse    74 KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVK 138

  Fly   119 VPRALDDPGRGHYWALDPYAEDLSIGETTGRLRRSNWQQNTGA----------------RPKVTG 167
            |||....||:|.||.|||  :..::.|....|||....:...|                .|:...
Mouse   139 VPRDDKKPGKGSYWTLDP--DSYNMFENGSFLRRRRRFKKKDAVKDKEEKGRLHLQEPPPPQAGR 201

  Fly   168 HPYQRMPYYGHGHGNGP 184
            .|....|....|...||
Mouse   202 QPAPAPPEQAEGSAPGP 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd19BNP_608369.1 FH 58..135 CDD:238016 43/76 (57%)
Foxc1NP_032618.2 Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q12948 1..51
FH 78..166 CDD:214627 47/89 (53%)
Nuclear localization signal 1 (NLS 1). /evidence=ECO:0000250|UniProtKB:Q12948 78..93 9/14 (64%)
Nuclear localization signal 2 (NLS 2). /evidence=ECO:0000250|UniProtKB:Q12948 168..176 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..326 7/46 (15%)
Required for transcriptional inhibition. /evidence=ECO:0000250|UniProtKB:Q12948 217..366 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..393
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..466
Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q12948 466..553
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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