DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd19B and Foxm1

DIOPT Version :9

Sequence 1:NP_608369.1 Gene:fd19B / 33010 FlyBaseID:FBgn0031086 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_032047.4 Gene:Foxm1 / 14235 MGIID:1347487 Length:757 Species:Mus musculus


Alignment Length:99 Identity:42/99 - (42%)
Similarity:58/99 - (58%) Gaps:8/99 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SSSSNSSSDSMAAKSNAKPAFTYSALIVMAIWSSSEKRLTLSGICKWIADNFPYYR-TRKSVWQN 104
            |..|.|..||:    :.:|.::|.|:|..||.|:..||:||..|..||.|:|||:: ..|..|:|
Mouse   221 SGVSTSWQDSV----SERPPYSYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIAKPGWKN 281

  Fly   105 SIRHNLSLNPFFVRVPRALDDPGRGHYWALDPYA 138
            ||||||||:..|||...|   .|:..:|.:.|.|
Mouse   282 SIRHNLSLHDMFVRETSA---NGKVSFWTIHPSA 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd19BNP_608369.1 FH 58..135 CDD:238016 35/77 (45%)
Foxm1NP_032047.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..167
FH 234..309 CDD:238016 35/77 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..348
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..560
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..635
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 660..709
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.