DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop2R and ser-3

DIOPT Version :10

Sequence 1:NP_001014758.2 Gene:Dop2R / 33007 FlyBaseID:FBgn0053517 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_491954.1 Gene:ser-3 / 259744 WormBaseID:WBGene00004778 Length:610 Species:Caenorhabditis elegans


Alignment Length:635 Identity:174/635 - (27%)
Similarity:272/635 - (42%) Gaps:160/635 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 LEQNLTGLYL----DGYRLNCTNETLNLTDSCGELRVVDHNYWA---------------LILILF 385
            :...|.|.::    |....|.|..||..|....|........|:               .:|.:.
 Worm     4 MRNTLNGQFIAENSDFLSENTTTTTLGFTPITEESPNCSFYEWSRNPSHAQFFRIFSIISVLTVL 68

  Fly   386 PILTLFGNILVILSVCRERSLQTVTNYFIVSLAIADLLVAVVVMPFAV-------YFLVNGAWAL 443
            .::.:.||.|||.:|...|.|::.|...|:|||:|||||..|::||::       |::....|  
 Worm    69 VVVVVLGNALVIAAVLLRRRLRSATGLLILSLALADLLVGTVILPFSIANEVLDQYWIFGETW-- 131

  Fly   444 PDVVCDFYIAMDVICSTSSIFNLVAISIDRYIAVTQPIKYAKHKNSRRVCLTILLVWAISAAIGS 508
                |..::.:|:...|:||:||||||||||||:.:|:.|.......|...|:.:||..|..|.|
 Worm   132 ----CTIWLTLDIWMCTASIYNLVAISIDRYIAIIKPLNYPMLVTKFRARCTVAIVWIGSFLICS 192

  Fly   509 PIVLGLNNTPNRE-PDVCAFYNAD--FILYSSLSSFYIPCIIMVFLYWNIFKALRSRARKQRAAR 570
            |.....::..::| |..|...||.  ::::|:.||||||.||:||:|:.|:.|.|:         
 Worm   193 PSFFLASSIKDKETPCRCTPANAGRVYVVFSASSSFYIPMIIVVFVYFRIYVAARA--------- 248

  Fly   571 KPHLSELTGGSVIENIAQTRRLAETALDSSRHASRILPDEAATNTASGSNEEEDENAI--SPDID 633
                                            |::.:.....:.||:.:.::..::.:  .||  
 Worm   249 --------------------------------ATKSIYSGMMSVTAAANKKQNPKSYLLNHPD-- 279

  Fly   634 DCHVIVNDKSTEFMLATVVEETGNSVVAQITTQPQLVVADPNGNHDSGYAASNVDDVLAGVAPAS 698
                ::|..|    |..:....|:|||||||..........|||        ::|....|.:..:
 Worm   280 ----VINKDS----LPMLRVHRGSSVVAQITPNKPYNTCRQNGN--------SIDATANGTSQIT 328

  Fly   699 ASAATSAAPRSSGSPPDSPLPSGATLQRSSV-SSQRRPTGDDSPKRG---EPALRSVGVDNSSVA 759
            | |||.|...::.|       :...:.|.:| ::|:.|.|....:.|   |.::.|:...||..|
 Worm   329 A-AATKARKFANDS-------AKTLVNRGAVGATQQAPIGARFKRHGRDSESSVDSMNGTNSYSA 385

  Fly   760 MKPLSFVRYGVQEAMTLARNDSTLSTTS--KT-------------------------------SS 791
            ....|    |.:|..:|..|..:.||.|  ||                               |.
 Worm   386 TPHKS----GNEELGSLIENSRSSSTDSNEKTEQLTNQTDDNFSMSNNNNNGDEKEAFDESLLSE 446

  Fly   792 RKDKKNSQASRFTIYKVHKASKKKREKSSAKK----ERKATKTLAIVLGVFLFCWLPFFSCNIMD 852
            .|.|..|.||:|.  .:.:..:|||...:.:|    |.||.||:|||.|.|:||||.|       
 Worm   447 SKKKSKSLASKFN--HLMRRGQKKRTAGAYEKRLSLEIKAAKTVAIVTGCFIFCWLGF------- 502

  Fly   853 AMCAKFKKDCRPGLTAYMMTTWLGYINSFVNPVIYTIFNPEFRKAFKKIM 902
              ...:..:.:.....:.:..||||:||.:||||||:||.|||..||:::
 Worm   503 --ALVYGLEIKLNDVVWSIVFWLGYLNSALNPVIYTVFNREFRICFKRLL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop2RNP_001014758.2 7tmA_D2-like_dopamine_R 376..>565 CDD:320181 72/213 (34%)
TM helix 1 377..403 CDD:320181 8/40 (20%)
TM helix 2 410..436 CDD:320181 14/32 (44%)
TM helix 3 448..478 CDD:320181 17/29 (59%)
TM helix 4 490..513 CDD:320181 8/22 (36%)
TM helix 5 529..558 CDD:320181 15/30 (50%)
7tm_GPCRs <822..898 CDD:475119 33/79 (42%)
TM helix 6 828..850 CDD:320181 12/21 (57%)
TM helix 7 866..891 CDD:320181 12/24 (50%)
ser-3NP_491954.1 7tmA_Octopamine_R 80..>252 CDD:320191 67/218 (31%)
TM helix 2 93..119 CDD:320191 13/25 (52%)
TM helix 3 132..162 CDD:320191 17/29 (59%)
TM helix 4 174..197 CDD:320191 8/22 (36%)
TM helix 5 216..245 CDD:320191 13/28 (46%)
7tm_GPCRs <479..546 CDD:475119 32/75 (43%)
TM helix 6 485..507 CDD:410628 12/30 (40%)
TM helix 7 514..539 CDD:410628 12/24 (50%)

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