DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop2R and Htr4

DIOPT Version :10

Sequence 1:NP_001014758.2 Gene:Dop2R / 33007 FlyBaseID:FBgn0053517 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_036985.2 Gene:Htr4 / 25324 RGDID:2850 Length:388 Species:Rattus norvegicus


Alignment Length:557 Identity:121/557 - (21%)
Similarity:181/557 - (32%) Gaps:273/557 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 RVVDHNYWALILILFPILTLFGNILVILSVCRERSLQTV-TNYFIVSLAIADLLVAVVVMPFAVY 434
            :||...::|:::    ::.:.||:||:::|||:|.|:.: |||||||||.|||||:|:||||...
  Rat    19 KVVLLTFFAMVI----LMAILGNLLVMVAVCRDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAI 79

  Fly   435 FLVNGAWALPDVVCDFYIAMDVICSTSSIFNLVAISIDRYIAV-TQPIKYAKHKNSRRVCLTILL 498
            .||...|...::.|....::||:.:|:|||:|..||:|||.|: .||:.|.......|:.|.:..
  Rat    80 ELVQDIWFYGEMFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGG 144

  Fly   499 VWAISAAIG-SPIVLGLNN------------TPNREPDVCAF-YNADFILYSSLSSFYIPCIIMV 549
            .|.|...|. .||:.|.||            ..|.....|.| .|..:.:..|:.:||||.::||
  Rat   145 CWVIPMFISFLPIMQGWNNIGIVDVIEKRKFNHNSNSTFCVFMVNKPYAITCSVVAFYIPFLLMV 209

  Fly   550 FLYWNIFKALRSRARKQRAARKPHLSELTGGSVIENIAQTRRLAETALDSSRHASRILPDEAATN 614
            ..|:.|:                                        :.:..||.:|        
  Rat   210 LAYYRIY----------------------------------------VTAKEHAQQI-------- 226

  Fly   615 TASGSNEEEDENAISPDIDDCHVIVNDKSTEFMLATVVEETGNSVVAQITTQPQLVVADPNGNHD 679
                                                                             
  Rat   227 ----------------------------------------------------------------- 226

  Fly   680 SGYAASNVDDVLAGVAPASASAATSAAPRSSGSPPDSPLPSGATLQRSSVSSQRRPTGDDSPKRG 744
                                                      ..|||:..:|:.||...|.    
  Rat   227 ------------------------------------------QMLQRAGATSESRPQTADQ---- 245

  Fly   745 EPALRSVGVDNSSVAMKPLSFVRYGVQEAMTLARNDSTLSTTSKTSSRKDKKNSQASRFTIYKVH 809
                                                                         :..|
  Rat   246 -------------------------------------------------------------HSTH 249

  Fly   810 KASKKKREKSSAKKERKATKTLAIVLGVFLFCWLPFFSCNIMDAMCAKFKKDCRPGL-------- 866
            :          .:.|.||.|||.:::|.|.|||.|||..||:|           |.:        
  Rat   250 R----------MRTETKAAKTLCVIMGCFCFCWAPFFVTNIVD-----------PFIDYTVPEKV 293

  Fly   867 -TAYMMTTWLGYINSFVNPVIYTIFNPEFRKAFKKIM 902
             ||::   |||||||.:||.:|...|..||:||..|:
  Rat   294 WTAFL---WLGYINSGLNPFLYAFLNKSFRRAFLIIL 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop2RNP_001014758.2 7tmA_D2-like_dopamine_R 376..>565 CDD:320181 72/204 (35%)
TM helix 1 377..403 CDD:320181 7/25 (28%)
TM helix 2 410..436 CDD:320181 19/25 (76%)
TM helix 3 448..478 CDD:320181 14/30 (47%)
TM helix 4 490..513 CDD:320181 7/23 (30%)
TM helix 5 529..558 CDD:320181 10/28 (36%)
7tm_GPCRs <822..898 CDD:475119 33/84 (39%)
TM helix 6 828..850 CDD:320181 11/21 (52%)
TM helix 7 866..891 CDD:320181 12/33 (36%)
Htr4NP_036985.2 7tmA_5-HT4 20..323 CDD:320184 118/550 (21%)
TM helix 1 21..47 CDD:320184 8/29 (28%)
TM helix 2 55..81 CDD:320184 19/25 (76%)
TM helix 3 93..123 CDD:320184 14/29 (48%)
TM helix 4 136..159 CDD:320184 7/22 (32%)
TM helix 5 189..218 CDD:320184 10/68 (15%)
TM helix 6 252..282 CDD:320184 16/29 (55%)
TM helix 7 291..316 CDD:320184 12/27 (44%)

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