DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep3 and goe

DIOPT Version :10

Sequence 1:NP_523417.2 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster
Sequence 2:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster


Alignment Length:773 Identity:164/773 - (21%)
Similarity:309/773 - (39%) Gaps:148/773 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SRNKTEKWLLITTFVMAITIFTLLIVLFTDGGSSDATKHVLHVQPHQKDCPSGNELP-------C 103
            |.::..:.|.:||..:...:..::|:|             |...|         |:|       |
  Fly   121 SLSRKRRILYVTTACLCALLLLIIILL-------------LAFWP---------EVPFYLRAPLC 163

  Fly   104 LNKHCIFASSEILKSIDVTVDPCDDFYGYSCNQWIKNNP------IPEGKSTWGTFGKLEQMNQL 162
            |:|.|:.:|.::|...:.:..||.:.|.::|..:..:..      |..|:..:.|:.:.:::|:|
  Fly   164 LDKECVESSRQLLLWANTSKSPCHETYEWACGNFASDYANHEYFVIKRGEWNYETYNEYQELNEL 228

  Fly   163 IIRNVLEKPAKSFKSDAERKAKVYYESCLDADEHMEKLGAKPMNDLLLQ-----IGGWNVTKSGY 222
              ...:.....|.:...|......|.||.:.|     :..|..:||||:     :.||...:...
  Fly   229 --NRFIAMLPNSQEGSVESTVSSLYRSCRETD-----VLDKSQSDLLLKRAINAVYGWQAFRDSN 286

  Fly   223 NVANWTMGHTLKILHNKYNFNCLFGWAIGEDDKNSSRHVIQIDQGGLTLPTADYYNNKTDNHRKV 287
            .:.:|.....|.:|..|:.....:...:.....|...:||.:|:|.|.||...:|.|..|  .:|
  Fly   287 RLQSWEYKRVLVVLQAKHGIFPYYRVTVENGFSNPHDYVITLDEGELGLPDKYFYGNDAD--EEV 349

  Fly   288 LNEYIEYMTKVCVLLG--ANESDARAQMIGVINFEKKLANITIPLEDRRNE--EAMYHPMQLRQL 348
            :..|...:....:.:|  :.|:|..|.  .:.::|:::.|   .:||.:.:  ..:...|:|..|
  Fly   350 VRGYKLLLRDFAINMGIVSREADLFAD--DIFHYERRIVN---HIEDAKADANRPINKLMRLADL 409

  Fly   349 SKLAPFLNWTDHFDNAMQMV--GRRVTDDEVVVVYAPDFLKNLSDIILKMEQTEEGKITLNNYLV 411
            ...||.|...:    ::|.:  ..::|:|..|:|..|:.:..||.::     :...|..:||::|
  Fly   410 KIKAPSLPILE----SLQAIFPKTKITEDTEVLVRDPEVMHALSVLL-----STSDKKPINNFIV 465

  Fly   412 WQAVRTLTSCLSKPFRDAYKGVRKALMGSDGGEEIWRYCVSDTNNVVGFAVGAIF---VRQAF-- 471
            |...|.:...|||.:|...:....||.|.......|..|.....:.:.|||.|:.   .||.|  
  Fly   466 WSLARKMLPHLSKEYRTLAETFDHALYGRTASYPRWLICSKVVRDWLPFAVDALQQQPPRQQFET 530

  Fly   472 -----HGESKPAAEQ-----MIAEIREAFKMNLQNLTWVDKQTREKAIEKANQISDMIGFPDYIL 526
                 .|.:|....:     |...:|...|.:|:...|::...|:...:|.|::....|.||.:|
  Fly   531 MTSKSRGLNKTQGNEELLKLMFFSLRNQLKDSLEQAKWLEPAARQFIQKKLNEMRLQFGIPDEVL 595

  Fly   527 -DPVELDKKYAELNITPNAYFENNIQVAIYNLKSNLKR-------LDQPVNKTNWGMTPQTVNAY 583
             .|..|.:.|.|| |..|.:|..:::......:|.:::       ||..|::......||.:  .
  Fly   596 QQPTYLAQYYNEL-ILNNVFFVEHLEWIWTFRRSQMEKKLGPLAILDVIVSEMYTRDNPQAI--A 657

  Fly   584 YTPTKNQIVFPAGILQTPFFDINNPKSLNFGAMGVVMGHELTHAFDDQGREYDKFGNINRWWDSK 648
            |:...|.::....::.:.::|...|.::||..:|.    ::..|.      .|.|......::::
  Fly   658 YSNKLNMLLVSKVLISSNYYDYRYPVAVNFARIGT----DILEAL------IDNFSTFLLQFNTQ 712

  Fly   649 SIERFNEKSE---------CIAR-------------QYSGYKMNGRTLNGKQTLGE------NIA 685
            |.:..:...|         |:|.             ..:..|....||:..:|...      |..
  Fly   713 STDISDAAPEIRYAQPDVNCLAAGQPPRLVHELNELSSNALKSFHVTLSAARTAARALSNFVNAI 777

  Fly   686 DNG------GLKAA--YHAYQRTKSDRDVDILKLPGL-NLTHSQLFFVSFAQVWCSST 734
            |.|      |:..|  |.|...|:.      |::||| :...::||.:|:.|..||:|
  Fly   778 DAGSAIQGSGIDQANTYEALGLTRR------LRIPGLRSFNENELFTLSYMQQHCSTT 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep3NP_523417.2 M13 123..784 CDD:341056 148/689 (21%)
goeNP_573160.1 GluZincin 184..>692 CDD:472708 117/533 (22%)

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