DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep3 and nep-24

DIOPT Version :10

Sequence 1:NP_523417.2 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster
Sequence 2:NP_503005.3 Gene:nep-24 / 190993 WormBaseID:WBGene00013786 Length:567 Species:Caenorhabditis elegans


Alignment Length:642 Identity:127/642 - (19%)
Similarity:240/642 - (37%) Gaps:141/642 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 FTLLIVL-----FTDGGSSDATKHVLHVQPHQKDCPSGNELPCLNKHCIFASSEILKSIDVTVDP 125
            |.||::|     ...|.::.||::|                 |....||..:..:....|.:|||
 Worm    13 FMLLLLLTCTAPLAIGATTPATRNV-----------------CNTPACITLAHMLHNYHDPSVDP 60

  Fly   126 CDDFYGYSCNQWIKNNPIPEGKSTWGTFGKLEQMNQLIIRNVLEKPAKSFKSDAERKAKVYYESC 190
            ||:|:.::|.:       .....|...:.|..:....|::..|:|...| :|.:|...:..|::|
 Worm    61 CDNFHQFACGR-------EHEHETEDIYTKKTKTINNIMKRFLKKNETS-RSKSENAMRTLYKAC 117

  Fly   191 LDADEHMEKLGAKPMNDL---LLQIGGWNVTKSGYNVANWTMGHTL--KILHNKYNFNCLF---- 246
            ...:::......|.:.|:   :..||.|.|....::.:.:.:...|  .:...:.||. ||    
 Worm   118 KTLEKNSTASRNKALQDIFQDIQSIGAWPVVDDKWDESKFDLNDFLVNLVRLGRKNFG-LFQMAR 181

  Fly   247 -----GWAIGEDDKNSSRHVIQIDQGGLTLPTADYYNNKTDNHRKVLNEYIEYMT--------KV 298
                 .:|||.:  .:.||.:.:   |.|:......|:...|::|:|::..||:.        |.
 Worm   182 YVNVRNFAIGPE--AAWRHNVDL---GKTISEILKANSVQTNNKKLLDDLAEYVNLEKALSQHKF 241

  Fly   299 CVLLGANESDARAQMIGVINFEKKLANITIPLEDRRNEEAMYHPMQLRQLSKLAPFLNWTDHFDN 363
            ..:........|:..:..:||.:.:..:..|  |:|.               |.|.:....:..|
 Worm   242 NTVQPGYIFSERSDFVSSVNFSRLVLEMMSP--DKRT---------------LFPEVYQIMYLTN 289

  Fly   364 AMQMVGRRVTDDEVVVVYAPDFLKNLSDIILKMEQTEEGKITLNNYLVWQAVRTLTSCLSKPFRD 428
            .....|:.               .||..||     ....|..|.|||:::.:.|..:.|:     
 Worm   290 TSLFFGKN---------------NNLETII-----RNTSKRALANYLIFKFIDTSIADLT----- 329

  Fly   429 AYKGVRKALMGSDGGEEIWRYCVSDTNNVVGFAVGAIFVRQAFHGESKPAAEQMIAEIREAFKMN 493
                     .||...     :|.....|.:..|....|.|.....|::    :.|.::.||.::.
 Worm   330 ---------YGSPSA-----FCEQKVINFLPRAALRAFYRNFISKENR----KKITKLTEATQVQ 376

  Fly   494 LQNL----TWVDKQTREKAIEKANQISDMIGFPDYILDPVELDKKYAELNITPNAYFENNIQVAI 554
            |..:    .|:..::::.|:::.:.::.:||:|||...|.:||..:..||::.:..:        
 Worm   377 LLKIIGATDWMSIKSKKIAMDRVSSMNMVIGYPDYFDPPGKLDGLFEHLNLSSSDTY-------- 433

  Fly   555 YNLKSNLKRL--DQPVNKTNWGMTPQ-------TVNAYYTPTKNQIVFPAGILQTPFFDINNPKS 610
            |.:...:.|.  :|.::... |..|.       ..||.|....|.::..|.....||||.:.|..
 Worm   434 YTVVRKINRFMREQEMDYYT-GEVPYYPLFPGLMTNAMYNANDNNLMIFAPFFDDPFFDSSFPDY 497

  Fly   611 LNFGAMGVVMGHELTHAFDDQGREYDKFGNINRWWDSKSIERFNEKSECIARQYSGY 667
            .|.......:.||:.|.|.....:. ..|....|...|..|.:.::.:|:..||:.|
 Worm   498 ANIAFTSNTLAHEMGHTFSPHLMDI-MTGTTEVWLTPKETEEYEKRVKCLEDQYTEY 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep3NP_523417.2 M13 123..784 CDD:341056 115/580 (20%)
nep-24NP_503005.3 GluZincin 58..561 CDD:472708 115/580 (20%)

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