DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep3 and nep-2

DIOPT Version :10

Sequence 1:NP_523417.2 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster
Sequence 2:NP_494343.2 Gene:nep-2 / 188090 WormBaseID:WBGene00020230 Length:736 Species:Caenorhabditis elegans


Alignment Length:762 Identity:261/762 - (34%)
Similarity:415/762 - (54%) Gaps:56/762 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SRNKTEKWLLITTFVMAITIFTLLIVLFTDGGSSDATKHVLHVQPHQKDCPSGNELPCLNKHCIF 110
            :::...:|..|...:..|.:...|:||    |::      ::...:.||...    .||:..||.
 Worm    10 TKSPGSRWTRIWAIIALILLILFLLVL----GAA------IYFYINYKDSSD----VCLSPGCIK 60

  Fly   111 ASSEILKSIDVTVDPCDDFYGYSCNQWIKNNPIPEGKSTWGTFGKLEQMNQLIIRNVLEKPAK-- 173
            .:|.||.|::.:||||||||.::|.||||.:|||:...:...|..|.|..:..::.:|::..:  
 Worm    61 TASVILSSMNSSVDPCDDFYEFACGQWIKGHPIPDDAPSVSNFENLGQDLEFALKELLDENDEPY 125

  Fly   174 SFKSDAERKAKVYYESCLDADEHMEKLGAKPMNDLLLQIGGWNVTKSGYNVANWTMGHTLK---- 234
            .:::.|..|||.:|..||:..|.::. .....::::...|||.           ::||.:|    
 Worm   126 DYETSAVGKAKYFYNLCLNESEILDN-WRTTFDEVVKSFGGWP-----------SLGHQMKPDAS 178

  Fly   235 --ILH----NKYNFNCLFGWAIGEDDKNSSRHVIQIDQGGLTLPTADYYNNKTDNHRKVLNEYIE 293
              :|:    .|:..:.||...:..|||||.|||:.|||..|.|...|:|....:..|..   |::
 Worm   179 IEMLYADMVAKFKADSLFKATVQPDDKNSQRHVLLIDQPQLNLFARDFYVAAENEERMA---YLQ 240

  Fly   294 YMTKVCVLLGANESDARAQMIGVINFEKKLANITIPLEDRRNEEAMYHPMQLRQLSKLAPFLNWT 358
            .:..|.:||.|:.:.|......:|:||..|||||:..|.|.:...:|..:.|.::.:..|..||.
 Worm   241 LIRDVLILLDADRTRATLDAKEIIDFETALANITMADEHRHDIAELYTKITLGEMRRSLPHFNWP 305

  Fly   359 DHFDNAMQMV----GRRVT--DDEVVVVYAPDFLKNLSDIILKMEQTEEGKITLNNYLVW-QAVR 416
            ..|:...:.:    |:|:|  |:..||||..:||:.|..:|.:.:..     .:.|||.| ...:
 Worm   306 LFFNRMFKDLHEKNGKRITFDDNTEVVVYGYEFLRRLDVLIPQYDNR-----LIVNYLEWCWFFK 365

  Fly   417 TLTSCLSKPFRDAYKGVRKALMGSDGGEEIWRYCVSDTNNVVGFAVGAIFVRQAFHGESKPAAEQ 481
            |:...|..||........|.|...:..:..|..||:..|:::..|..||:|:..|..|:|...|:
 Worm   366 TMLRDLPDPFALTIFKFYKTLNIMNVQKVRWHGCVTRINSLMPMATSAIYVKNHFDHEAKQQVEE 430

  Fly   482 MIAEIREAFKMNLQNLTWVDKQTREKAIEKANQISDMIGFPDYILDPVELDKKYAELNITPNAYF 546
            ||:.|.|:|...|.:..|:.|:|::.|.:|.|::...||:|||:.||..::.:|....:.|..|:
 Worm   431 MISLIMESFVDLLLSEDWLTKETKQTAKQKVNEMKRKIGYPDYLNDPAAVNNEYKTFKVYPGHYY 495

  Fly   547 ENNIQVAIYNLKSNLKRLDQPVNKTNWGMTPQTVNAYYTPTKNQIVFPAGILQTPFFDINNPKSL 611
            :..........:..|:|:.:.|::..|......|||:|:|..|:|:|||||||..|:..:.|.|:
 Worm   496 QTKFSFYEQYQRDVLERITEAVDRERWVAGAALVNAFYSPNTNEIIFPAGILQPVFYSKDFPSSM 560

  Fly   612 NFGAMGVVMGHELTHAFDDQGREYDKFGNINRWWDSKSIERFNEKSECIARQYSGYKMN--GRTL 674
            |||.:|||:|||:||.|||:||.||..|||.:|||:.:|.:|..|::||.:|||.|.::  ...:
 Worm   561 NFGGIGVVIGHEITHGFDDRGRLYDNLGNIRQWWDNATISKFEHKAQCIEKQYSSYVLDQINMQI 625

  Fly   675 NGKQTLGENIADNGGLKAAYHAYQRTKSDRDVDILKLPGLNLTHSQLFFVSFAQVWCSSTTDETN 739
            |||.|.|||||||||||.||.||::.:. |.....:|||:||||.||||:::||:||.:..|:..
 Worm   626 NGKSTKGENIADNGGLKQAYRAYKKYEK-RHSRPPRLPGVNLTHDQLFFLNYAQIWCGTMNDKEA 689

  Fly   740 LLQMEKDPHSPSQFRVIGTLSNMKEFAEVFQCKPGKRMNPTEKCEVW 786
            :.::....|||...||.|.|||..:||:.:.|:||.:|||.|||.||
 Worm   690 IRKLRTSEHSPGPIRVKGPLSNSYDFAKAYNCEPGSQMNPREKCRVW 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep3NP_523417.2 M13 123..784 CDD:341056 241/681 (35%)
nep-2NP_494343.2 M13 73..734 CDD:341056 241/681 (35%)

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