DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep3 and F41C6.4

DIOPT Version :10

Sequence 1:NP_523417.2 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster
Sequence 2:NP_001129930.1 Gene:F41C6.4 / 185599 WormBaseID:WBGene00018278 Length:393 Species:Caenorhabditis elegans


Alignment Length:599 Identity:102/599 - (17%)
Similarity:177/599 - (29%) Gaps:264/599 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LNKHCIF-ASSEILKSIDVTVDPCDDFYGYSCN-------QWIKNNPI------PEGKSTWGTFG 154
            :|..|.: ...:.:..||.:.|||||||.::|.       ..:|..||      .:.:|.|....
 Worm    13 INSTCAYDFFRDAINLIDQSSDPCDDFYRHACPVGDYDFLVLMKYAPIFKELETSQEESAWENLK 77

  Fly   155 KLEQMNQLIIRNVLEKPAKSFKSDAERKAKVYYESC-LDADEHMEKLGAKPMNDLLLQIGGWNVT 218
            ..|.:|.:       ||     .:.|.:...|:|.. ||..::.:    ..|...||:       
 Worm    78 IEEALNNI-------KP-----GEIENEISAYFERVFLDMCQNND----PAMTTFLLR------- 119

  Fly   219 KSGYNVANWTMGHTLKILHNKYNF-----NCLFGWAIGEDDKNSSRHVIQIDQGGLTLPTADYYN 278
                         |.::|.::.:.     |||.  .:| .|.|.:|            ...|:.:
 Worm   120 -------------TQQMLSHEMSTKCRAENCLL--RLG-GDSNCTR------------AANDFKS 156

  Fly   279 ---NKTDNHRKVLNEYIEYMTKVCVLLGANESDARAQMIGVI---NFEKKLANITIPLEDRRNEE 337
               .|||:     :.|.||:.|:...:...::..||  :.::   ||:..:.||.          
 Worm   157 RVAKKTDS-----SHYQEYVLKLRENIAGWKNKTRA--VNILLDGNFKVGVDNIN---------- 204

  Fly   338 AMYHPMQLRQLSKLAPFLNWTDHFDNAMQMVGRRVTDDEVVVVYAPDFLKNLSDIILKMEQTEEG 402
                                                          .||.|:.|::|:       
 Worm   205 ----------------------------------------------SFLMNMVDVLLQ------- 216

  Fly   403 KITLNNYLVWQAVRTLTSCLSKPFRDAYKGVRKALMGSDGGEEIWRYCVSDTNNVVGFAVGAIFV 467
                     |..|              ||.:.|                                
 Worm   217 ---------WIQV--------------YKYIAK-------------------------------- 226

  Fly   468 RQAFHGESKPAAEQMIAEIREAFKMNLQNLTWVDKQTREKAIEKANQISDMIGFPDYILDPVELD 532
                                ..|::.||...||:.|...:|:|...:  |:....:|   .::|.
 Worm   227 --------------------NPFELILQETPWVNDQKINRALEAVAR--DLFVIDEY---GIQLR 266

  Fly   533 KKYAELNITPNAYF--------ENNIQVAIYNLKSNLKRLDQPVNKTNWGMTPQTVNAYYTPTKN 589
            :....|..|...:.        ::::..:||:......           |.|...::..|..|..
 Worm   267 ENIDALMKTEQDFLKCSADFSGKHDLFCSIYSYHFMFN-----------GRTTTVLHFGYDATNR 320

  Fly   590 QIVFPAGILQTPFF--DINNPKSLNFGAMGVVMGHELTHA-FDDQGREYDKFGNINRWWDSKSIE 651
            ......|:   ||.  ..|:..:.|.|..|.|:||||:|: .::..:.|        .....|.|
 Worm   321 HPYIYFGM---PFIARAANSEMAANLGLAGYVVGHELSHSLIENPSKSY--------LLPYSSAE 374

  Fly   652 RFNEKSECIARQYS 665
            ..|    ||..||:
 Worm   375 AIN----CIQTQYN 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep3NP_523417.2 M13 123..784 CDD:341056 98/579 (17%)
F41C6.4NP_001129930.1 PepO 1..>105 CDD:442809 25/103 (24%)

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