DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep3 and nep-1

DIOPT Version :10

Sequence 1:NP_523417.2 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster
Sequence 2:NP_496490.2 Gene:nep-1 / 174787 WormBaseID:WBGene00013926 Length:754 Species:Caenorhabditis elegans


Alignment Length:713 Identity:242/713 - (33%)
Similarity:383/713 - (53%) Gaps:67/713 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 ASSEILKSIDVTVDPCDDFYGYSCNQWIKNNPIPEGKSTWGTFGK-----LEQMNQLIIRNVLEK 170
            ||..:.||:::::||||||:.|:|..|:.::|||:..:::..|..     |.:|.:|...|....
 Worm    72 ASRLLQKSLNLSLDPCDDFFEYACRAWVDSHPIPDDLTSYSQFTATREKVLAEMRKLYEDNTSIP 136

  Fly   171 PAKSFKSDAERKAKVYYESCLDADEHMEKLGAKPMNDLLLQIGGWNVTKSGYNVANWTMGHT--- 232
            .:||.     ...|..|.:|:|.::| ..:||:   |||.:|..:     ||    |.|.|.   
 Worm   137 TSKSI-----ALIKQIYNTCMDTEKH-NAVGAR---DLLEKIKTY-----GY----WPMVHNEKW 183

  Fly   233 -------LKILHN---KYNFNCLFGWAIGEDDKNSSRHVIQIDQG--GLTLPTADYY--NNKTDN 283
                   .|:|.|   ..:.:..|.:...||.:|.||.::..|||  ||...|.|||  ..|.:.
 Worm   184 RESTFDLTKLLSNTIQSRDVSVFFDFGPAEDSRNVSRRLLSFDQGSLGLGYSTRDYYLDEKKYEK 248

  Fly   284 HRKVLNEY----IEYMTKVCVLLGANESDARAQMIGVINFEKKLANITIPLEDRRNEEAMYHPMQ 344
            ..|...:|    :.|.|:... :..|||...:.:..:|.|||:.|.|.:..|||||...:|:..:
 Worm   249 QMKAYRKYTIGKVRYYTEDAG-MAVNESKIESDVDEIIAFEKEWAQILVAEEDRRNYTKLYNVRR 312

  Fly   345 LRQLSKLAPFLNW------TDHFDNAMQMVGRRVTDDEVVVVYAPDFLKNLSDIILKMEQTEEGK 403
            ...|.:....::|      |..|     :|...:..:..:::...::|:.::.::    |..:.:
 Worm   313 FDDLKEYMSIIDWKKLTLSTTPF-----LVHSYLKTNPSIIISDVEYLQKMNTLL----QNTDPR 368

  Fly   404 ITLNNYLVWQAVRTLTSCLSKPFRDAYKGVRKALMGSDGGEEIWRYCVSDTNNVVGFAVGAIFVR 468
            | :.||::.:...:.:..:.|.:.|..:.....:.|....:..|:.|||.....:.:|.|:::||
 Worm   369 I-VTNYILLRWAGSWSQEIGKKYEDLQQEFAFQMYGRKQRQPRWKDCVSSAGGKLSYASGSMYVR 432

  Fly   469 QAFHGESKPAAEQMIAEIREAFKMNLQNLTWVDKQTREKAIEKANQISDMIGFPDYILDPVELDK 533
            :.|...:|.....||.:::|||:..:....|:|.:|::.|:|||:|:...||:||:||:..:||.
 Worm   433 KYFDANAKNTTLDMITDLQEAFRNMMHANDWMDAETKKYALEKADQMLKQIGYPDFILNDEKLDD 497

  Fly   534 KYAELNITPNAYFENNIQVAIYNLKSNL--KRLDQPVNKTNWGMTPQTVNAYYTPTKNQIVFPAG 596
            .|..|...|...|...::.:| ..::|.  :||.:|||:..:..:...|||:|:||:|.|.||||
 Worm   498 WYKGLEGAPEDSFSQLVEKSI-QWRNNFYYRRLLEPVNRFEFISSAAVVNAFYSPTRNAIAFPAG 561

  Fly   597 ILQTPFFDINNPKSLNFGAMGVVMGHELTHAFDDQGREYDKFGNINRWWDSKSIERFNEKSECIA 661
            |||.||||...||:||:|.:|.|:|||:||.|||.||::|..||:..|||:.:..:|||:::||.
 Worm   562 ILQQPFFDARFPKALNYGGIGAVIGHEITHGFDDTGRQFDNVGNLRDWWDNTTSSKFNERTQCII 626

  Fly   662 RQYSGYKMNGRTL--NGKQTLGENIADNGGLKAAYHAYQRTKSDRDVDILKLPGL-NLTHSQLFF 723
            .||:..|:.|..|  |||.|.|||||||||:|.|:.||:...........:||.. :||:.||||
 Worm   627 EQYADVKLRGTDLRINGKLTQGENIADNGGIKQAFKAYKSYLEKHGGQEARLPQFESLTNEQLFF 691

  Fly   724 VSFAQVWCSSTTDETNLLQMEKDPHSPSQFRVIGTLSNMKEFAEVFQCKPGKRMNPTEKCEVW 786
            |.:|||||.:.|.||..|.:..|||||...||...|:|..||||.|:|..|..||||::|.||
 Worm   692 VGYAQVWCGAKTPETKTLLLLTDPHSPETARVNTVLTNQPEFAEAFKCPAGSPMNPTKRCVVW 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep3NP_523417.2 M13 123..784 CDD:341056 235/697 (34%)
nep-1NP_496490.2 M13 85..751 CDD:341056 235/695 (34%)

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