DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep3 and nep-5

DIOPT Version :10

Sequence 1:NP_523417.2 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster
Sequence 2:NP_001364754.1 Gene:nep-5 / 173933 WormBaseID:WBGene00017393 Length:694 Species:Caenorhabditis elegans


Alignment Length:770 Identity:167/770 - (21%)
Similarity:308/770 - (40%) Gaps:179/770 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 TTFVMAITIFTLLIVLFTDG--GSSDATKHVLHVQPHQKDCPSGNELPCLNKHCIFASSEILKSI 119
            |...:..|:..|::::|..|  |..|.:......:| ||......:|||..|.|:..|:|:|:.:
 Worm    61 TVLAVITTLVILVLLIFALGALGLHDISAFKWEPKP-QKALRIMLDLPCQTKECVKYSAELLELM 124

  Fly   120 DVTVDPCDDFYGYSCNQWIKNNPIPEGKSTWGTFGKLEQMNQLIIRNVLEKPAKSFKSDAERKA- 183
            |.:|:||::|:.:.||.:   ||..:         ..|::.:||  |:.|||       ..||| 
 Worm   125 DSSVNPCENFHHHVCNGF---NPRKK---------DFERLMKLI--NIQEKP-------DHRKAV 168

  Fly   184 ----KVYYESCLDADEHMEKLGAKPMNDLLLQ-------IGGWNVTKSGYNVANWTMGHTLK--- 234
                ::..:..:...|.:.::|.  ::.::|.       ...|.......:.:|.:..::..   
 Worm   169 NVVRRMLSKCAMGKTEEIHQVGR--LSSIILPGLPFPLLNNSWTKPSDPISTSNSSTTYSYPFLT 231

  Fly   235 ------ILHNKYNFNCLFGWAIGEDDKNSSRHVIQIDQGGLTLPTADYYNNKTDNHRKVLNEYI- 292
                  ||||..:..  |.......|...|..|::.....||       |.|..|...:|.... 
 Worm   232 KILAHIILHNPDDAG--FVGIKPSSDSEFSLFVVKPFSPVLT-------NFKFRNMYDILKRNAP 287

  Fly   293 EYMTKVCVLLGANESDARAQMIGVINFEKKLANITIPLEDRRNEEAMYHPMQLRQLSKLAPFLNW 357
            |..|...:.|   |.|.:.|:..||..:.||..|    |.:.:.|.    :.|.::.:..|.::|
 Worm   288 ESSTNGMIDL---EFDRQRQLNDVIKLQTKLEKI----EFKADPEV----VNLTEIQRQMPIIDW 341

  Fly   358 TDHFDNAMQMVGRRVTDD----------EVVVVYAPDFLKNLSDIILKMEQTEEGKITLNNYLVW 412
                        :|:.|.          |.|..:...:.:.::.||     :.....|:.|:|. 
 Worm   342 ------------KRLIDSWIPNGYAHLKEKVYGFNTSYYEEINAII-----SSTPSETIYNFLF- 388

  Fly   413 QAVRTLTSCLSKPFRDAYKGVRKALMGSDGGEEIWRYCVSDTNNVVGFAVGAIFVRQAFHGESKP 477
                         .|.::|.:|     ::...::...|:...:..:   .|.|    ..:|..:|
 Worm   389 -------------LRFSFKFLR-----TEVASDLEDTCLHQLSTTI---PGKI----VLYGSEEP 428

  Fly   478 AA----EQMIAEIREAFKMNLQNLTWVDKQTREKAIEKANQISDMIGFP-DYILDPVELDKKYAE 537
            .|    ..|:..|::..|.:|..|.|:|.:..|:|.:|.|:...:.||. :.::|  ||..|   
 Worm   429 EALNLLNGMLHTIKDQLKRSLATLKWMDSRGIEEAQKKFNKTKTVFGFTGEDLID--ELVGK--- 488

  Fly   538 LNITPNAYFENNIQ-VAIYNLKSNLKRLDQPVNKTNWGMTPQTVNAYYTPTKNQIVFPAGILQTP 601
              |||.:.:.:.:| |.::..::..|.:.:  |.....:..:   .:|:..||:|.....:|..|
 Worm   489 --ITPESNYISTLQNVLLWQTRNMFKSVAE--NNVTVFLNSE---VFYSVEKNEITISRALLHYP 546

  Fly   602 FFDINNPKSLNFGAMGVVMGHELTHAFDDQGREYDKFGNINRWWDSKSIERFNEKSECIARQYSG 666
            |...|.|...||..:...:..::.|.||::||.||..||...||:::: ||:   .:.|.:.:.|
 Worm   547 FMSANLPNYTNFATIASKILPQMIHIFDERGRFYDSDGNHRNWWNTET-ERY---FQIIVQCFDG 607

  Fly   667 YKMNGRTLNGKQTLGENIADNGGLKAAYHAYQRTKSDRDVDILKLPGLNLTHSQ-LFFVSFAQVW 730
            ...|        ..|.:::      ..::||..||.    ....|||:..:..: |||.|..:..
 Worm   608 MMQN--------VFGVSVS------IGWNAYDSTKE----PYATLPGIQQSSDEALFFYSMVKTM 654

  Fly   731 CSSTTDETNLLQMEKDPHSPSQFRVIGTLSNMKEFAEVFQCKPGKRMNPTEKCEV 785
            |:|..|..|                 ..|:::.:|...|:|..|.:|||..||::
 Worm   655 CTSDPDNVN-----------------EALASVPQFNSAFKCNNGTKMNPPTKCKL 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep3NP_523417.2 M13 123..784 CDD:341056 147/699 (21%)
nep-5NP_001364754.1 GluZincin 128..691 CDD:472708 147/699 (21%)

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