DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep3 and nep-11

DIOPT Version :10

Sequence 1:NP_523417.2 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster
Sequence 2:NP_494538.1 Gene:nep-11 / 173685 WormBaseID:WBGene00017557 Length:848 Species:Caenorhabditis elegans


Alignment Length:797 Identity:261/797 - (32%)
Similarity:425/797 - (53%) Gaps:65/797 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 WNWRSRNKTEKWLL-ITTFVMAITIFTLLIVLFTD----------------GGSSDATKH----- 84
            | |:||...||.|| :......:|...|.:::.||                .|..|.|::     
 Worm    65 W-WKSRTTMEKLLLPVLLLFCLLTAVLLAVIINTDKRIEAMKTDHATQTEHAGFGDPTENPTKTA 128

  Fly    85 ----VLHVQPHQKDCP-----SGNELP-----CLNKHCIFASSEILKSIDVTVDPCDDFYGYSCN 135
                |..:.|.....|     :..|.|     |....|:.|::..|.:::.:|||||||:.::|.
 Worm   129 EDPRVPPIVPEAPTSPEPEVTTSTEKPKEPEVCSTPGCVRAATHFLNAMNTSVDPCDDFFEFACG 193

  Fly   136 QWIKNNPIPEGKSTWGTFGKLEQMNQLIIRNVLEKPAKSFKSDAERKAKVYYESCLDADEHMEKL 200
            ||...:|||:....:|||....:..:..:|.:||:...: :|::...|:..|.||::..: :::|
 Worm   194 QWNDQHPIPDDMYGFGTFAYAREQVRQQLRVLLEQEVVT-ESESINMARATYRSCMNKTQ-LDEL 256

  Fly   201 GAKPMNDLLLQIGGWNVTKSGYNVANWTMGHTLKILHNKYNFNCLFGWAIGEDDKNSSRHVIQID 265
            ...|:.:.|.::|.|.:.:..::...:.....|......|..:..|...|..|.||:||:.:.||
 Worm   257 MTGPLFETLTELGEWPLLQENWDKTKFNFTSLLVNSRRDYGVDVFFQLYIYADSKNTSRNTLFID 321

  Fly   266 QGGLTL--PTADYYNNKT--DNHRKVLNEYIEYMTKVCVLLGA------NESDARAQMIGVINFE 320
            |..|.|  .|.|||.|.|  .:|   :..|.:|:.::..||..      :||:..|.:..:|:||
 Worm   322 QSTLALGRGTRDYYLNTTLFSSH---MTAYRKYLRQIAHLLKTDGNLTRSESEMNADIEKIIDFE 383

  Fly   321 KKLANITIPLEDRRNEEAMYHPMQLRQLSKLAPFLNWTDHFDN-AMQMVGRRVTDDEVVVVYAPD 384
            .:||.|.:..::|||...:|:..|::.|..|.|.::|...|.: |...:.....::..:::...:
 Worm   384 IELAKIIVAEDERRNNTRLYNKRQIQDLYNLLPQVDWVPFFQSIAPSDLTHLFHNETEIIICEIE 448

  Fly   385 FLKNLSDIILKMEQTEEGKITLNNYLVWQAVRTLTSCLSKPFRDAYKGVRKALMGSDGGEEIWRY 449
            :|:::|::|   |:|:.|.:|  ||::|:.|::....|.:.|.|..:...|.:.|.......|:.
 Worm   449 YLQHVSELI---EKTDVGLLT--NYVLWRVVQSNVRYLDERFEDIKQDFLKVMTGQQQSPPRWKD 508

  Fly   450 CVSDTNNVVGFAVGAIFVRQAFHGESKPAAEQMIAEIREAFKMNLQNLTWVDKQTREKAIEKANQ 514
            |....:.|:..|.|||:|:..|....|..|.:||..:|.:|...::...|:|::|:..||||||.
 Worm   509 CAQVPSTVLPLAAGAIYVQAHFQESDKHEALRMIMHLRNSFADLVRQNDWMDEETKAVAIEKANS 573

  Fly   515 ISDMIGFPDYILDPVELDKKYAELNIT-PNAYFENNIQVAIYNLKSNLKRLDQPVNKTNWGMTPQ 578
            :.:.||:||...|..:|||:|..|:|: .:.|:....:..::......::|.:|.:|..:.::|.
 Worm   574 MINNIGYPDVTNDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQKLTKPFDKHEFDISPA 638

  Fly   579 TVNAYYTPTKNQIVFPAGILQTPFFDINNPKSLNFGAMGVVMGHELTHAFDDQGREYDKFGNINR 643
            .|||:|:|.||.|.|||||||.|||....||::|:||:|.|:|||:||.|||||.:|||.||::.
 Worm   639 VVNAFYSPEKNAITFPAGILQPPFFSGTFPKAVNYGAIGAVIGHEITHGFDDQGSQYDKDGNLHN 703

  Fly   644 WWDSKSIERFNEKSECIARQYSGY---KMNGRTLNGKQTLGENIADNGGLKAAYHAYQRTKSDRD 705
            ||...|:..|:.:..||..||..|   |.|.| :|||.|.|||||||||:|.|:.|||:..::..
 Worm   704 WWSESSLNSFDTRRRCIVEQYGNYTVPKTNFR-VNGKLTQGENIADNGGVKEAFQAYQKYVTENG 767

  Fly   706 VDILKLPGL-NLTHSQLFFVSFAQVWCSSTTDETNLLQMEKDPHSPSQFRVIGTLSNMKEFAEVF 769
            .: .:|||| ..|:.|:||||:|..||....:...:.|:..|.|||..|||||.||||:.||:|:
 Worm   768 EE-PRLPGLQQYTNEQIFFVSYAHFWCGKKKEAAAMQQVLTDEHSPEVFRVIGVLSNMQAFADVY 831

  Fly   770 QCKPGKRMNPTEKCEVW 786
            :|.....:||..||.||
 Worm   832 KCPRNAPVNPDHKCIVW 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep3NP_523417.2 M13 123..784 CDD:341056 234/676 (35%)
nep-11NP_494538.1 M13 181..845 CDD:341056 233/675 (35%)

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