DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep3 and nep-10

DIOPT Version :10

Sequence 1:NP_523417.2 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster
Sequence 2:NP_494532.2 Gene:nep-10 / 173684 WormBaseID:WBGene00017555 Length:711 Species:Caenorhabditis elegans


Alignment Length:807 Identity:169/807 - (20%)
Similarity:316/807 - (39%) Gaps:191/807 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LLITTFVMAITIFTLLIVLFTDGGSSDATKHVLHVQPHQKDCPSGNELP--------CLNKHCIF 110
            ||:..|:..:|:...:.:.......||  ..:....|.||.....:|..        |.:..||.
 Worm    22 LLLIVFLALVTVHIKMTIDVAPVFKSD--DPLPRGDPDQKPATIDSETQTVDEPRNVCESPECIT 84

  Fly   111 ASSEILKSIDVTVDPCDDFYGYSCNQWIKNNPIPEGK--STWGTFGKLEQMNQLIIRNVLEKPAK 173
            .:.|:....|.:||||.|||.:.|.::.:::.|.:|:  :...|..||  :.:.:::|      |
 Worm    85 LAHELHNYKDPSVDPCQDFYQHFCGKFYEHSAIGQGRMATKRSTLSKL--IREFLLKN------K 141

  Fly   174 SFKSDAERKAKVYYESCLDADEHMEKLGAKPMNDLL------LQIGGWNVTKSGYNVANWTMGHT 232
            :..|.:|...|..|..|.:. :.:..|.:.|...||      .:||.|.|....::.:.:.:...
 Worm   142 TSTSKSENTMKQVYAKCREL-QKISDLNSIPPQALLDIFSDIKKIGAWPVLDKDWDGSKFNLNEM 205

  Fly   233 LKILHNK-------YNFN------CLFGWAIGEDDKNS----------SRHVIQIDQGGLTLPTA 274
            |:.|.|.       ::|:      .|....:.:..:.|          ..:.|::|||       
 Worm   206 LRQLVNLGETHLGFFHFDFIARPYVLIKPPLKQGVQKSVLEKVVKMILEANEIKMDQG------- 263

  Fly   275 DYYNNKTDNHRKVLNEYIEYMTKVCV---------LLGANESDARAQMIGVINFEKKLANITIPL 330
                     ..:.|:||.|...::.:         ::|......|....|:|             
 Worm   264 ---------FSEDLDEYFELSNRIKIDKLPRTSRSIVGLLPDVRRINFRGLI------------- 306

  Fly   331 EDRRNEEAMYHPMQLRQLSKLAPFLNWTDHFDNAMQMVGRRVTDDEVVVVYAPDFLK----NLSD 391
                        :::...||:..||.               ....:||..:.|.|::    |..|
 Worm   307 ------------LEMMPRSKMNRFLG---------------TLFQKVVTYHHPLFVRDNETNHLD 344

  Fly   392 IILKMEQTEEGKITLNNYLVWQAVRTLTSCLSKPFRDAYKGVRKALMGSDGGEEI--------WR 448
            .|::.....    .|.|||::..:.:....|:...:...:...|.::     :|:        .|
 Worm   345 TIIRSTSNR----ALANYLIFNFIHSSIKFLTFGLKSDRERCEKIVV-----QELPRPSLRVFMR 400

  Fly   449 YCVSDTNNVVGFAVGAIFVRQAFHGESKPAAEQMIAEIREAFKMN-LQNLTWVDKQT---REKAI 509
            .||...|                        .:.:|::.|..|.| |:.:...|..|   :::.:
 Worm   401 NCVDKGN------------------------REEVAKLTETVKENVLEMIRESDSFTPSVKKRVL 441

  Fly   510 EKANQISDMIGFPDYILDPVELDKKYAELNI-TPNAYFENNIQVAIYNLKSNLKRLDQPVNKTNW 573
            :|...|..:||:||:...|..|||:|..|.: ..::|::.:.::....|:..::.|.        
 Worm   442 KKVEAIGAIIGYPDHFDPPGTLDKEYENLTLDASDSYYKMSQKLHQLRLQHQMEFLA-------- 498

  Fly   574 GMTPQT-------VNAYYTPTKNQIVFPAGILQTPFFDINNPKSLNFGAMGVVMGHELTHAFDDQ 631
            |.||.:       |||:|....|.:...|..|..||||...|:.:|....|.::|||..|:.|  
 Worm   499 GQTPLSPSDQVLEVNAHYDSKDNALTVLAPFLDDPFFDSTYPEYVNLIFTGFLIGHEFGHSID-- 561

  Fly   632 GREYDKFGNINRWWDSKSIERFNEKSECIARQYSGY--KMNGRTLNGKQTLGENIADNGGLKAAY 694
                .|....:.|:.::.:..:.::::|:..||..|  ..:|:.:||...:||.:.|..|....:
 Worm   562 ----PKILRRDGWYKTEDMTEYGKRAQCLIDQYDNYDDPDHGKQMNGTYCIGEIVGDWVGRDVTW 622

  Fly   695 HAYQRTKSDRDVDILKLPGLNLTHSQLFFVSFAQVWCSSTTDETNLLQMEKDPHSPSQFRVIGTL 759
            .|:::....:...::.....||  .||:|...:..:|...:.: :|.|:..|||....|||.|..
 Worm   623 RAFKKMDLSKMQKLIGFEDKNL--DQLYFRIQSLFFCGPRSMK-SLEQLLSDPHPTEVFRVNGIY 684

  Fly   760 SNMKEFAEVFQCKPGKRMNPTEKCEVW 786
            |||.:||:.|.|..|..|||.:||:::
 Worm   685 SNMPQFAKAFNCPIGSPMNPEKKCKMF 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep3NP_523417.2 M13 123..784 CDD:341056 153/726 (21%)
nep-10NP_494532.2 M13 97..709 CDD:341056 153/726 (21%)

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