DRSC/TRiP Functional Genomics Resources

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Protein Alignment pico and grb7

DIOPT Version :9

Sequence 1:NP_608363.1 Gene:pico / 33003 FlyBaseID:FBgn0261811 Length:1162 Species:Drosophila melanogaster
Sequence 2:XP_003201390.1 Gene:grb7 / 563649 ZFINID:ZDB-GENE-091118-23 Length:530 Species:Danio rerio


Alignment Length:396 Identity:100/396 - (25%)
Similarity:178/396 - (44%) Gaps:60/396 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 VKAFTSDGASKSLLVDERMGCGHVTRLLADKNHVQMQSNWALVEHLGDLQMERLFEDHELLVDNL 434
            |:.|:.....:|:||..|.....|.::||...|...:.:|||:||...|.:||..|||||::...
Zfish   105 VRVFSDATHCRSVLVSSRATAHDVCQMLAQSAHCTDEESWALIEHHTALGLERCLEDHELVLQVQ 169

  Fly   435 MTWHSDAGNRVLFQQRPDKVTLFLRPELYLPGPQMAPGCQHDE-QTRQMLLDEFFDSHNQLQMDG 498
            .:|..:...::||::...|...|.:|..:.|...::......: .|...|:.....|.:..::.|
Zfish   170 SSWPVEGDTKLLFRKN
YAKYEFFKKPVSFFPEHMISDSADVTKGMTSSELVQNMVKSGSCPEIQG 234

  Fly   499 PLYMKADPKKGWKRYHFVLRSSGLYYFPKEKTKNTR------DLACLNLFHGHNVYTGLGWRKKW 557
            .|:::...||.||:.:||||.||||...|.::|..|      ||..||:|   .|:||   ||.:
Zfish   235 FLHVREGGKKSWKKLYFVLRRSGLYCSSKGQSKEPRHLQFTGDLEDLNVF---TVFTG---RKHY 293

  Fly   558 KSPTDYTFGFKAVGDSSLGKSCRSLKMLCAEDLPTLDRWLTAIRVCKYGKQLWDSHKSLLEDLCL 622
            .:|.::.|..|:..:...|   :.||::||:...:...|:||.|:.|:|.||..:::     |..
Zfish   294 GAPGEHVFCIKSSKERFRG---QDLKLMCADSEQSRTCWITAFRLFKHGTQLQQNYQ-----LSQ 350

  Fly   623 SRDDAVSQSSFAASMRSESISSISSAVPSQCGSVSSAISSMSNSTSGRTSRASSSSSSGCLSDDN 687
            ||....|:.....:.|.||:.::                ..|..:.||.           :.:.:
Zfish   351 SRLHKPSKPDSKFTDRDESMVAM----------------DFSGKSGGRV-----------IQNPH 388

  Fly   688 NAFDSEFTTG-TIKRKPSMKPNLPLTTMTRQLKEVGEITICESAGGDASSPERSGTLTRRHSRRK 751
            .|.::|...| :.:::.:::.:||..:...||..|..:           .|...|.::|..:.|.
Zfish   389 EAHNAEQEEGHSWRKREALRHSLPPNSHGSQLPAVHRV-----------QPWFHGGVSRTKAERL 442

  Fly   752 SQESNG 757
            .:|..|
Zfish   443 LEEQGG 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
picoNP_608363.1 GRB7_RA 364..451 CDD:176382 26/80 (33%)
PH_APBB1IP 489..614 CDD:269961 44/130 (34%)
PH 494..605 CDD:278594 39/116 (34%)
grb7XP_003201390.1 UBQ 103..185 CDD:294102 26/79 (33%)
PH_APBB1IP 225..347 CDD:269961 44/130 (34%)
PH 230..334 CDD:278594 38/112 (34%)
BPS 367..408 CDD:286088 8/67 (12%)
SH2_Grb7_family 423..530 CDD:198197 7/37 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593081
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3751
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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