DRSC/TRiP Functional Genomics Resources

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Protein Alignment pico and apbb1ip

DIOPT Version :10

Sequence 1:NP_608363.1 Gene:pico / 33003 FlyBaseID:FBgn0261811 Length:1162 Species:Drosophila melanogaster
Sequence 2:NP_956928.2 Gene:apbb1ip / 393607 ZFINID:ZDB-GENE-040426-1318 Length:645 Species:Danio rerio


Alignment Length:961 Identity:245/961 - (25%)
Similarity:353/961 - (36%) Gaps:387/961 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 PLTPEAKQLSHTYRISMAN----LEDSQESELDQILGELSLLEAQISYTEASMLPAMCAPSAGAQ 173
            |..||.::::  :.|..||    |.|.::::||.::.:   |.|.||.||...............
Zfish    35 PTIPEPQEMN--FSIGFANFNESLNDLEDNDLDALMAD---LVADISATEEKFATERDTSKGSVS 94

  Fly   174 IAPPPGVTQLPGSAPTMVSMSASSSRSHSRTNSTISADVSSCSSSGISENGHGLGLVLGGPGSAG 238
            :||.|...|...|.|.    |..||:..:.:||                        :..|    
Zfish    95 VAPAPSKPQSNFSLPA----SFDSSKPATSSNS------------------------IAAP---- 127

  Fly   239 MMVQPPPPGGMTMGITLGVVTPREPRTESPDNDSAFSDTVSLLSSESSASSNTSLQQQQQQQQQQ 303
                ||||                          ||..:                          
Zfish   128 ----PPPP--------------------------AFKPS-------------------------- 136

  Fly   304 HHQHQQHHQHQQQQQKPQLAGAEKLHHHGVHGQHGGQQSGANSITKADKIQLALHKLESAPIRRL 368
                       :::::.||                          |||||:|||.||:.|.:::|
Zfish   137 -----------KEEEEEQL--------------------------KADKIKLALEKLKEAKVKKL 164

  Fly   369 FVKAFTSDGASKSLLVDERMGCGHVTRLLADKNHVQMQSNWALVEHLGDLQMERLFEDHELLVDN 433
            .||...:||:||:|:||||.....|...|.:|.|.....:|::.|...|||.||.|||||.||:.
Zfish   165 VVKVEITDGSSKTLMVDERQTVRDVMDNLFEKTHCDCNVDWSVCETNPDLQTERAFEDHENLVEP 229

  Fly   434 LMTWHSDAGNRVLFQQRPDKVTLFLRPEL-YLPGPQMAPGCQHDEQTRQMLLDEFFDSHNQL--Q 495
            |.||..|..|:||||::..|..:|..|:: ||............|:.::.||:|.|...:.:  .
Zfish   230 LSTWTRDTENKVLFQEKKHKYEVFKNPQIFYLWKKDKKSLKDMKEKDKEQLLEENFCGASVIVPD 294

  Fly   496 MDGPLYMKADPKKGWKRYHFVLRSSGLYYFPKEKTKNTRDLACLNLFHGHNVYTGLGWRKKWKSP 560
            ::|.||:|.|.||.||:.:|:||:|||||.||.|||.:|||.||..|...|||....:|.|:|:|
Zfish   295 LEGVLYLKEDGKKSWKQRYFLLRASGLYYSPKGKTKASRDLVCLVQFDNVNVYYCKEYRIKYKAP 359

  Fly   561 TDYTFGFKAVGDSSLGKSCRSLKMLCAEDLPTLDRWLTAIRVCKYGKQLWDSHKSLLEDLCLSRD 625
            ||:.|..|   ...:.|..:.:|.:|.:|..:::.|:|.|||.||||||:|::|:          
Zfish   360 TDHCFMLK---HPQIQKESQYIKFMCCDDEWSMNLWVTGIRVAKYGKQLYDNYKA---------- 411

  Fly   626 DAVSQSSFAASMRSESISSISSAVPSQCGSVSSAISSMSNSTSGRTSRASSSSSSGCLSDDNNAF 690
             ||.::|.:||.                              :.||.:|||::|:          
Zfish   412 -AVRKASGSASW------------------------------ANRTIQASSTAST---------- 435

  Fly   691 DSEFTTGTIKRKPSMKPNLPLTTMTRQLKEVGEITICESAGGDASSPERSGTLTRRHSRRKSQES 755
                        ||..|.                  .::|.|.|..|                  
Zfish   436 ------------PSPTPK------------------AKAANGHAPQP------------------ 452

  Fly   756 NGSGTLKRRPIAVPVATVVKQTEPMGSASSTSSSSNSTPTPTPSICAKPPPGDSASLMCSSTLSL 820
                         ||...|            .|:.:|.|.|.|                    |:
Zfish   453 -------------PVENKV------------PSNQSSLPPPPP--------------------SM 472

  Fly   821 DSLPPPPPPPALDGSEDQDVYGSQLSLASLPPPPPPEDVLAMNYAEPSSPSTPTPMST------- 878
            |.||||||.|..                   |||||        |.|:.|:.|.|:|:       
Zfish   473 DFLPPPPPDPMF-------------------PPPPP--------APPAPPAPPVPVSSTKVNKFP 510

  Fly   879 -PMIMPNSNGSLPPAVPAKPMKPAVKQAAGGLKAAPPYKA--PPDYV-----------GPALLPG 929
             |...|.|  |.||.:...|..|           .||..|  |||::           |.:|.|.
Zfish   511 PPPKFPQS--SFPPPMDDLPPPP-----------PPPEIADLPPDFLPPPPPSFGSHGGESLPPP 562

  Fly   930 PP-----LPPPPPAQKKVSFADSPVLLRRKMCSPEPVLPQRSPSTTLSCHSSSSAGSAYQTYAPG 989
            ||     |||||||......|..|         |.|..|..:|:..    :::.|||..:...| 
Zfish   563 PPDPVASLPPPPPAFTSAGGAPPP---------PPPPPPPPAPAPA----ANNPAGSVRKVAPP- 613

  Fly   990 PMLPPRADVARLSSLSNGSSSEVTSPKRLQESASNPPRDFLKDLQRVMRKK 1040
               ||:....:|::.|.|                    ||:.:|...|:||
Zfish   614 ---PPKRTTPQLTAPSGG--------------------DFMSELMNAMQKK 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
picoNP_608363.1 RA_MRL_MIG10 366..451 CDD:340555 39/84 (46%)
PH_APBB1IP 489..614 CDD:269961 55/126 (44%)
apbb1ipNP_956928.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 82..141 18/157 (11%)

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