DRSC/TRiP Functional Genomics Resources

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Protein Alignment pico and GAB1

DIOPT Version :9

Sequence 1:NP_608363.1 Gene:pico / 33003 FlyBaseID:FBgn0261811 Length:1162 Species:Drosophila melanogaster
Sequence 2:XP_016863455.1 Gene:GAB1 / 2549 HGNCID:4066 Length:738 Species:Homo sapiens


Alignment Length:751 Identity:152/751 - (20%)
Similarity:223/751 - (29%) Gaps:294/751 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   500 LYMKADPKKGWKRYHFVLRSSG-------LYYFPKEKTKNTRDLACLNLFHGHNVYTGLGWRKKW 557
            ||.|   ||.|||..|||||..       |.|:..:..|....:..|||.  ..|..||.:.|| 
Human     6 LYKK---KKAWKRRWFVLRSGRLTGDPDVLEYYKNDHAKKPIRIIDLNLC--QQVDAGLTFNKK- 64

  Fly   558 KSPTDYTFGFKAVGDSSLGKSCRSLKMLCAEDLPTLDRWLTAIRVCKYGKQLWDSHKSLLEDLC- 621
            :....|.|....:.         .:..|.|:....:::|:..|  |               |:| 
Human    65 EFENSYIFDINTID---------RIFYLVADSEEEMNKWVRCI--C---------------DICG 103

  Fly   622 --LSRDDAVSQSSFAASMRSESISSISSAVPSQCGSVSSAI------------------------ 660
              .:.:|.|.....:....::...:|::|.||.....|||.                        
Human   104 FNPTEEDPVKPPGSSLQAPADLPLAINTAPPSTQADSSSATLPPPYQLINVPPHLETLGIQEDPQ 168

  Fly   661 ---------SSMSNSTSGRTSRASSSSSSGCLSDDNNAFDSEFTTGTIKRKPSMKPNLPLTTMTR 716
                     |.....||..:|..|.......|.:|   |:|:              .:||.|...
Human   169 DYLLLINCQSKKPEPTSQGSSFVSEEGEEYLLLED---FESK--------------TIPLQTHAD 216

  Fly   717 QLKEVGEITICESAGGDASSPERSGTLTRRHSRRKSQESNG-SGTLKRR------PIAVPVATV- 773
            ..|.....|.|........:|            ..||..:| :|..:::      |...|.|:| 
Human   217 SAKSTSSETDCNDNVPSHKNP------------ASSQSKHGMNGFFQQQMIYDSPPSRAPSASVD 269

  Fly   774 ----------VKQTEPMGSASSTSSSSN----STPTPTPSICAK-----------PPPGDSASL- 812
                      .....|..|.|||.:...    :||:.|.|:..:           |.||::..: 
Human   270 SSLYNLPRSYSHDVLPKVSPSSTEADGELYVFNTPSGTSSVETQMRHVSISYDIPPTPGNTYQIP 334

  Fly   813 ------MCSSTLSLDSLP--PPPPPPALDGSEDQDVYGSQLSLASLPPPPPPEDVLAMNYAEPS- 868
                  ....|..||::|  |||.||....:.|:    |.:...|:|......|   .:|..|: 
Human   335 RTFPEGTLGQTSKLDTIPDIPPPRPPKPHPAHDR----SPVETCSIPRTASDTD---SSYCIPTA 392

  Fly   869 --SPSTPTPMST------------------PMIMPNSN-------------------GSLPPA-- 892
              |||....:||                  |...|:..                   ||:...  
Human   393 GMSPSRSNTISTVDLNKLRKDASSQDCYDIPRAFPSDRSSSLEGFHNHFKVKNVLTVGSVSSEEL 457

  Fly   893 ----VPAKPMKPAVK---------QAAGGLKAAP------------PYKAPPDYVG----PALLP 928
                ||..|..|..:         |.|..:...|            |   ||.::|    |...|
Human   458 DENYVPMNPNSPPRQHSSSFTEPIQEANYVPMTPGTFDFSSFGMQVP---PPAHMGFRSSPKTPP 519

  Fly   929 GPPLP----PPPPAQKKVS---FADSPVLLR-------------------RKMCSPEPV------ 961
            ..|:|    .|||..:.:.   ...||.:||                   |:...|.|:      
Human   520 RRPVPVADCEPPPVDRNLKPDRKGQSPKILRLKPHGLERTDSQTIGDFATRRKVKPAPLEIKPLP 584

  Fly   962 ------LPQRSPSTTL---------------SCHSSSSAGSAY---QTYAP-GPMLPPRADVARL 1001
                  .|.|||.|..               |.||::|:..::   :.|.| .|.|.........
Human   585 EWEELQAPVRSPITRSFARDSSRFPMSPRPDSVHSTTSSSDSHDSEENYVPMNPNLSSEDPNLFG 649

  Fly  1002 SSLSNGSSSEVTSPK----------RLQESASNPPR 1027
            |:..:|.||.:..||          .|....|.|||
Human   650 SNSLDGGSSPMIKPKGDKQVEYLDLDLDSGKSTPPR 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
picoNP_608363.1 GRB7_RA 364..451 CDD:176382
PH_APBB1IP 489..614 CDD:269961 31/120 (26%)
PH 494..605 CDD:278594 31/111 (28%)
GAB1XP_016863455.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3751
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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