DRSC/TRiP Functional Genomics Resources

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Protein Alignment pico and COBLL1

DIOPT Version :9

Sequence 1:NP_608363.1 Gene:pico / 33003 FlyBaseID:FBgn0261811 Length:1162 Species:Drosophila melanogaster
Sequence 2:NP_001265387.1 Gene:COBLL1 / 22837 HGNCID:23571 Length:1233 Species:Homo sapiens


Alignment Length:1159 Identity:215/1159 - (18%)
Similarity:353/1159 - (30%) Gaps:411/1159 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 TTTTTTTTAAGFVAG---GDCPVIGAGAGAGVKLRRHSDRPLTPEAKQLSHTYRISMANLEDSQE 137
            |.|.:.|.:..:::.   .|.|           .:|.:..|..|.::.:..       :|...||
Human   335 TFTRSNTISKPYISNTLPSDAP-----------KKRRAPLPPMPASQSVPQ-------DLAHIQE 381

  Fly   138 SELDQILGELSLLEAQISYTEAS-------MLPAMC------------APSAGAQIAPPPG---- 179
            .....|:..:|:.|...|..||.       .|.:|.            |||..::|.|...    
Human   382 RPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENS 446

  Fly   180 -VTQL---PGSAPTMVSMSASSSRSHSRTNS--TISADVSS---CSSSGISENGHGLGLVLGGPG 235
             ||.|   .|..|.    |||.:.|....:|  |....:||   |::..:.|...    |...||
Human   447 RVTALQPVDGVPPD----SASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETS----VFECPG 503

  Fly   236 SAGMMVQPPPPGGMTMGI----TLGVVTPREPRTESP----DNDSAFSDTVSLLSSE-------- 284
            :....:.     .:|.||    :|..:..:|..:|.|    :|.|..|..:..:|::        
Human   504 TPEAAIT-----SLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKND 563

  Fly   285 -----SSASSNTSLQQQQQQQQQQHHQHQQHHQ--HQQQQQKPQLAGAEKLHHHGVHGQHGGQQS 342
                 .:.|...|....:::|:.:....|:.|.  :.....|..:.....|...|.:.::..|  
Human   564 PDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKSLGPNQENVVQ-- 626

  Fly   343 GANSI-----TKADKIQLALHKLESAPIRRLFVKAFTSDGASKSLLVD---ERMGCGHV----TR 395
              |.|     ...|.::..:.|.|           ...:|.:|:..:|   ||......    |.
Human   627 --NEIIVYPENTEDNMKNGVKKTE-----------INVEGVAKNNNIDMEVERPSNSEAHETDTA 678

  Fly   396 LLADKNHVQMQS------NWALVEHLGDLQMERL---------FEDHEL-----------LVDNL 434
            :...:||:...|      |....|...|..::..         .:||.|           ..:|:
Human   679 ISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNI 743

  Fly   435 MTWHS-----DAGNRVLFQQRPDKVTLFLRPELYLPGPQMAPGCQHDEQTRQMLLDEFFDSHNQL 494
            .|.||     |:.|  ..::...:.||.:..|  .|.....|.|.|..       |:.....:::
Human   744 STQHSCLSSQDSVN--TSREFRSQGTLIIHSE--DPLTVKDPICAHGN-------DDLLPPVDRI 797

  Fly   495 QMDGPL-YMKADPKKGWKRYHFVLRSSGLY---YFPKEKTKN--TRDLACLNLFHGHNVY----- 548
            ..:... |:|..|               ||   |.||.|..|  ||:....   .|...|     
Human   798 DKNSTASYLKNYP---------------LYRQDYNPKPKPSNEITREYIPK---IGMTTYKIVPP 844

  Fly   549 TGLGWRKKWKSPTDYTFGFKAVGDSSLGKSCRSLKMLCAEDLPTLDRWLTAIRVCKYGKQLWDSH 613
            ..|...|.|:|.|                    ::....:|:..|            ||:  .:|
Human   845 KSLEISKDWQSET--------------------IEYKDDQDMHAL------------GKK--HTH 875

  Fly   614 KSLLEDLCLSRDDAVSQS--------SFAASMRSESISSISSAVPSQCGSVSSAISSMSNSTSGR 670
            :::.|....:.|.|:|:|        ....::|:|      ..|||   ||||...:|       
Human   876 ENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTE------HQVPS---SVSSPDDAM------- 924

  Fly   671 TSRASSSSSSGCLSDDNNAFDSEFTTGTIKRKPSMKPNLPLTTMTRQLKEVGEITICESAGGDAS 735
                                     ...:|..|.|..:.........|:|:..|.          
Human   925 -------------------------VSPLKPAPKMTRDTGTAPFAPNLEEINNIL---------- 954

  Fly   736 SPERSGTLTRRHSRRKSQESNGSGTLKRRPIAVPVATVVKQTEPMGS---ASSTSSSSNSTPTPT 797
                       .|:.||:.||..        |.|.:..::..:.:..   .|:.:.|.::.|.|.
Human   955 -----------ESKFKSRASNAQ--------AKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPA 1000

  Fly   798 PSICAK--------PPPGDSASLMCSSTLS-LDSLPPPPPPPALDGSEDQDVYGSQLSLASLPPP 853
            |.....        |.|        ..||| |..:|...|.|.::.::| ||.|...:.|| |||
Human  1001 PKELTNKEAERDMLPSP--------EQTLSPLSKMPHSVPQPLVEKTDD-DVIGQAPAEAS-PPP 1055

  Fly   854 --PPPEDVLAMNYA-------------EPSSPSTPTPMSTPMIMPNSNGSLPPAVPAKPMKPAVK 903
              |.|..:.|...:             .|.|.|.|:|.:..::  ..:.|........|...|:.
Human  1056 IAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVV--KRSQSFSKERTESPSASALV 1118

  Fly   904 QAAGGLKAAPPYKAPPDYVGPALLPGPPLPPPPPAQKKV----SFADSPVLLRRKMCSPEPVLPQ 964
            |                            ||....:.|.    .|.|.|.|              
Human  1119 Q----------------------------PPANTEEGKTHSVNKFVDIPQL-------------- 1141

  Fly   965 RSPSTTLSCHSSSSAGSAYQTYAPGPMLPPRADVARLSSLSNGSSSEVTSPKRLQESASNPPRDF 1029
                 .:|...::||.:...:..|.|...|...|.|.|||:..||    .|:::::|.....|  
Human  1142 -----GVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSS----DPEQMRQSLLTAIR-- 1195

  Fly  1030 LKDLQRVMRKKWQVAQKCKAEPATTPHEVLGFRDFSNEDLLAAHNLNSGANSSH 1083
                      ..:.|.|.|.  .|.|...:.....|.    .:|:::..|...|
Human  1196 ----------SGEAAAKLKR--VTIPSNTISVNGRSR----LSHSMSPDAQDGH 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
picoNP_608363.1 GRB7_RA 364..451 CDD:176382 21/124 (17%)
PH_APBB1IP 489..614 CDD:269961 23/135 (17%)
PH 494..605 CDD:278594 21/121 (17%)
COBLL1NP_001265387.1 UBQ 113..182 CDD:294102
Cobl 197..275 CDD:286545
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3751
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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