DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pico and Grb7

DIOPT Version :9

Sequence 1:NP_608363.1 Gene:pico / 33003 FlyBaseID:FBgn0261811 Length:1162 Species:Drosophila melanogaster
Sequence 2:NP_034476.1 Gene:Grb7 / 14786 MGIID:102683 Length:535 Species:Mus musculus


Alignment Length:507 Identity:125/507 - (24%)
Similarity:193/507 - (38%) Gaps:120/507 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 PPPGGMTMGITLGVVTPREPRTES------PDNDSAFSDTVSLLSSESSASSNTSLQQQQQQQQQ 302
            ||||.:.....|.:.:.|:.|.|.      |...:.|.:..|                       
Mouse    34 PPPGDVKRSQPLPIPSSRKLREEEFQATSLPSIPNPFPELCS----------------------- 75

  Fly   303 QHHQHQQHHQHQQQQQKPQLAGAEKLHHHGVHGQHGGQQSGANSITKADKIQLALHKLESAPIRR 367
                        ...|||.|.|:                |||..:...|..:|.:          
Mouse    76 ------------PPSQKPILGGS----------------SGARGLLPRDSSRLCV---------- 102

  Fly   368 LFVKAFTSDGASKSLLVDERMGCGHVTRLLADKNHVQMQSNWALVEHLGDLQMERLFEDHELLVD 432
              ||.::.|||.:|:.|.......||..:|..:.|.....:|.|||....|.:||..||||.:|:
Mouse   103 --VKVYSEDGACRSVEVAAGATARHVCEMLVQRAHALSDESWGLVESHPYLALERGLEDHEFVVE 165

  Fly   433 NLMTWHSDAGNRVLFQQRPDKVTLFLRPELYLPGPQMAPGCQHDEQT---RQMLLDEFFDSHNQL 494
            ....|.....:|.:|::...|..||..|...|...:|...|. |.||   .:.|:..|.::.:..
Mouse   166 VQEAWPVGGDSRFIFRKNFAKYELFKSPPHTLFPEKMVSSCL-DAQTGISHEDLIQNFLNAGSFP 229

  Fly   495 QMDGPLYM----KADPKKGWKRYHFVLRSSGLYYFPKEKTKNTRDLACLNLFHGHNVYTGLGWRK 555
            ::.|.|.:    :...:|.|||:...||.|||||..|..:|:.|.|..:...:..|||.....||
Mouse   230 EIQGFLQLRGSGRGSGRKLWKRFFCFLRRSGLYYSTKGTSKDPRHLQYVADVNESNVYVVTQGRK 294

  Fly   556 KWKSPTDYTFGFKAVGDSSLGKSCRSLKMLCAEDLPTLDRWLTAIRVCKYGKQLWDSH------- 613
            .:..|||  ||| .|..:.|....:.|.:.|:||..:...||.|.|:.|||.||:.::       
Mouse   295 LYGMPTD--FGF-CVKPNKLRNGHKGLHIFCSEDEQSRTCWLAAFRLFKYGVQLYKNYQQAQSRH 356

  Fly   614 -----------KSLLEDLCLSRD-------------DAVSQS-SFAASMRSESISSISSAVPSQC 653
                       :|:.::..::.|             :|:|.: ..|.:.|.::...:|  :|:.|
Mouse   357 LRLSYLGSPPLRSVSDNTLVAMDFSGHAGRVIDNPREALSAAMEEAQAWRKKTNHRLS--LPTTC 419

  Fly   654 --GSVSSAISSMSNSTSGRTSRASSSSSSGCLSDDNNAFDSEFTTGTIKRKP 703
              .|:|:||........||.||..|....|    .....|..|.....:|.|
Mouse   420 SGSSLSAAIHRTQPWFHGRISREESQRLIG----QQGLVDGVFLVRESQRNP 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
picoNP_608363.1 GRB7_RA 364..451 CDD:176382 26/86 (30%)
PH_APBB1IP 489..614 CDD:269961 43/146 (29%)
PH 494..605 CDD:278594 38/114 (33%)
Grb7NP_034476.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90 18/106 (17%)
RA_GRB7 102..186 CDD:340557 26/95 (27%)
PH_APBB1IP 224..350 CDD:269961 43/128 (34%)
BPS 369..413 CDD:370203 6/43 (14%)
SH2_Grb7 428..535 CDD:198276 11/44 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847707
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3751
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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