DRSC/TRiP Functional Genomics Resources

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Protein Alignment pico and pico

DIOPT Version :10

Sequence 1:NP_608363.1 Gene:pico / 33003 FlyBaseID:FBgn0261811 Length:1162 Species:Drosophila melanogaster
Sequence 2:XP_061497476.1 Gene:pico / 1273266 VectorBaseID:AGAMI1_014224 Length:1180 Species:Anopheles gambiae


Alignment Length:1260 Identity:577/1260 - (45%)
Similarity:691/1260 - (54%) Gaps:315/1260 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GAASSAGVAGAAAGGATTTTTTTTAAGFVAGGDCPVIGAGAGAGVKLRRHSDRPLTPEAKQLSHT 124
            |:...:|..|.....|..|.||....                          ||.:..:.:.:.:
Mosquito    24 GSFDISGTPGTTVNPAAATVTTAARL--------------------------RPKSNTSAERTDS 62

  Fly   125 YRISMANLEDSQESELDQILGELSLLEAQISYTEASMLPAMCAPSAGAQIAPPPGVTQLPGSAPT 189
            ||.||||||::||:|||.||||||:||.:                                    
Mosquito    63 YRFSMANLEETQEAELDAILGELSILEER------------------------------------ 91

  Fly   190 MVSMSASSSRSHSRTNSTISA-------DVSSCSSSGISENGHGLGLVLGGPGSAGMMVQPPPPG 247
               ......||||||||||||       ..|.|||.....      :..||..::||      .|
Mosquito    92 ---GDLRHGRSHSRTNSTISAATNTTLSSESGCSSVAADT------VCSGGSIASGM------GG 141

  Fly   248 GMTMGITLGVVTPREPRTESPDNDSAFSDTVSLLSSESSASSNTSLQQQQQQQQQQHHQHQQHHQ 312
            |:..|   .:...|||||:||||||||||||||:||||||||:.|            |.|.:|.|
Mosquito   142 GVGGG---NISLHREPRTDSPDNDSAFSDTVSLMSSESSASSSVS------------HSHLKHLQ 191

  Fly   313 HQQQQQKPQLAGAEKLHHHGVHGQHGGQQSGANSIT------KADKIQLALHKLESAPIRRLFVK 371
                   ...|.:..:..:.|.....||..|.|:..      |..||.|||.|||.|.:||||||
Mosquito   192 -------AAAAASGGMVANSVPTALSGQTIGTNNNNNQPDGGKQAKIHLALQKLEQASVRRLFVK 249

  Fly   372 AFTSDGASKSLLVDERMGCGHVTRLLADKNHVQMQSNWALVEHLGDLQMERLFEDHELLVDNLMT 436
            |||:|||||||||||.|.||||||||||||||||:..||:||||.:.||||||||||:||||||.
Mosquito   250 AFTADGASKSLLVDETMSCGHVTRLLADKNHVQMEPTWAIVEHLPEHQMERLFEDHEMLVDNLML 314

  Fly   437 WHSDAGNRVLFQQRPDKVTLFLRPELYLPGPQMAPGCQHDEQTRQMLLDEFFDSHNQLQMDGPLY 501
            |:.|:.|||||.||||||.||..||.:|||.|||||.:|||.||.|||||||:|.:|:.::||||
Mosquito   315 WNRDSKNRVLFLQRPDKVALFKTPEAFLPGTQMAPGSEHDEHTRTMLLDEFFNSGSQIALEGPLY 379

  Fly   502 MKADPKKGWKRYHFVLRSSGLYYFPKEKTKNTRDLACLNLFHGHNVYTGLGWRKKWKSPTDYTFG 566
            ||.|.|||||:||||||:|||:|:|||||::.:||.||.||.||.||.||||:||.|:|:||||.
Mosquito   380 MKNDAKKGWKKYHFVLRASGLHYYPKEKTRSAKDLLCLALFAGHEVYRGLGWKKKHKAPSDYTFA 444

  Fly   567 FKAVGDSSLGKSCRSLKMLCAEDLPTLDRWLTAIRVCKYGKQLWDSHKSLLEDLCLSRDDAVSQS 631
            .:.....:..|..||:|||||||..|::.|:|||||.||||:|.|:|::||:||.....|.:|  
Mosquito   445 LRCPKLPAGVKGIRSVKMLCAEDASTMENWITAIRVMKYGKKLLDNHRTLLDDLARDELDKLS-- 507

  Fly   632 SFAASMRSESISSISSAVPSQCGSVSSAISSMSNST---------------------SGRTSRAS 675
                |.||.||.||.|:||||| |..|:.||.|.|.                     :||.||||
Mosquito   508 ----SARSSSIGSIVSSVPSQC-STGSSNSSGSGSNHLLVPLSATNGSNANNCTANGNGRLSRAS 567

  Fly   676 SSSSSGCLSDDNNAFDSEFTTGTIKRKPSMKPNLPLTTMTRQLKEVGEITICESAGGDASSPE-- 738
            ||||||||||:||.|||||.|||||||||||||||||:||||||||||.|..:.:.|...|..  
Mosquito   568 SSSSSGCLSDENNGFDSEFPTGTIKRKPSMKPNLPLTSMTRQLKEVGETTRLKDSPGSVGSGSIG 632

  Fly   739 RSGTLTRRHSRRKSQESNGSGTLKRRPIAVPVATVVKQTEPMGSASSTSSSSNSTPTP------- 796
            ..||||||||||:|:||.|||||||||:         .|:..||..|.|||: |||||       
Mosquito   633 EGGTLTRRHSRRRSEESTGSGTLKRRPM---------PTQNRGSIESMSSSA-STPTPVGSVLNT 687

  Fly   797 ------------------------------------------------TPSICAKPPP-----GD 808
                                                            |.|..:.|||     ||
Mosquito   688 PVNFEPPPVTILSPLGGHPTIVTPNGGNGGGNVPGTTTTIIEPVPSCMTDSTFSLPPPPPPPVGD 752

  Fly   809 S--ASLMCSSTLSLDSLPPPPPPPALDGSEDQDVYGSQLSLAS--LPPPPPPEDVLAMNYAEP-S 868
            .  .:....||||||||||||||..||.|    ..||||||||  |||||||...:....|.| :
Mosquito   753 DPMGANFSGSTLSLDSLPPPPPPNELDNS----FSGSQLSLASVQLPPPPPPSAAVGGATAAPAA 813

  Fly   869 SPSTPTPM-STPM--------------IMPN--------SNGSLPPAVPA-----------KPMK 899
            |||.||.: |:|.              :||:        ::.:||...||           |.:|
Mosquito   814 SPSMPTAVQSSPAARADSLQEKRPAANVMPSVAQSIMKLNSHTLPNPAPASAILKKEPIYSKTLK 878

  Fly   900 PAVKQAAGGLKAAPPYKAPPDYVG--PALLPGPPLPPPPPAQ-KKVSFADSPVLLRRKMCSPEPV 961
            |:      .|| ||||||||.|.|  .....|..:..||||. |.||||:||||||||:|..:.|
Mosquito   879 PS------ALK-APPYKAPPPYNGGEGGSASGAEVATPPPASAKSVSFAESPVLLRRKVCFEDEV 936

  Fly   962 LPQRSPSTTLSCHSSSSAGSAYQTYAPGPMLPPRADVARLSSLSNGSSSEVTSPKRLQESASNPP 1026
            :.|..|.:.....:|.|.|      .|.|  ||||:..||       |:..||||||.||::|||
Mosquito   937 VVQEVPPSPRRICASYSVG------PPAP--PPRAEATRL-------STTYTSPKRLSESSANPP 986

  Fly  1027 RDFLKDLQRVMRKKWQVAQKCKAEPATTPHEVLGFRDFSNEDLLAAHNLNSG----ANSSHYYRE 1087
            |||||||||||.||||||||||.||||||||||||||.        |...:|    ::::.||||
Mosquito   987 RDFLKDLQRVMNKKWQVAQKCKLEPATTPHEVLGFRDI--------HGGGAGSDLYSSATPYYRE 1043

  Fly  1088 TANVSHWVRKHYEYAHNALYENVHAQ----------SAAAAGVPGSGEATTPPLPPPPGNSV--- 1139
            |||||:||::||..|.:.||||:.:.          :|..:.||..     |.|||..|..:   
Mosquito  1044 TANVSNWVQEHYGAAPDGLYENLGSNMGMEPNYPIVAANVSAVPAH-----PHLPPTAGGPMLQG 1103

  Fly  1140 -----AAKKRPPPPPPKRSDKTHLT 1159
                 :.||||||||||||:||.||
Mosquito  1104 GGGGGSIKKRPPPPPPKRSEKTQLT 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
picoNP_608363.1 RA_MRL_MIG10 366..451 CDD:340555 67/84 (80%)
PH_APBB1IP 489..614 CDD:269961 74/124 (60%)
picoXP_061497476.1 None

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