DRSC/TRiP Functional Genomics Resources

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Protein Alignment pico and grb10

DIOPT Version :10

Sequence 1:NP_608363.1 Gene:pico / 33003 FlyBaseID:FBgn0261811 Length:1162 Species:Drosophila melanogaster
Sequence 2:XP_012819769.1 Gene:grb10 / 100151701 XenbaseID:XB-GENE-485564 Length:591 Species:Xenopus tropicalis


Alignment Length:530 Identity:131/530 - (24%)
Similarity:221/530 - (41%) Gaps:89/530 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 SPDNDSAFSDTV--------SLLSSESSASSNTSLQQQQQQQQQQ------HHQHQQHHQHQQQQ 317
            :||:|......|        :|.|:.:|.|.:..|.:..|..:.|      :......|:.:.|:
 Frog    43 NPDDDVDLEALVNDMNSSLDNLYSTCTSVSESVPLLKNGQLNRSQLPNSGTNSLPSMPHKQKLQR 107

  Fly   318 QKPQLAGAEKLHHHGVHGQHGGQQSGANSI-----------TKADKIQLALHKL-ESAPI-RRLF 369
            .:|       :|.|.|. :...:|...:|:           |.|....|....| ::.|: ::..
 Frog   108 SQP-------MHIHAVR-RLQEEQLRTSSLPAIPNPFPELCTPASSPVLVPGSLPQNQPVGKKSV 164

  Fly   370 VKAFTSDGASKSLLVDERMGCGHVTRLLADKNHVQMQSNWALVEHLGDLQMERLFEDHELL--VD 432
            ||.|:.||.||.:.:...|......:||..::|....::|.||||...|.:||..||||::  |.
 Frog   165 VKVFSEDGTSKVVEILADMTARDFCQLLVYQSHCVDDNSWTLVEHHPHLGLERCLEDHEMVVHVQ 229

  Fly   433 NLMTWHSDAGNRVLFQQRPDKVTLFLRPELYLPGPQMAPGCQHDEQT--RQMLLDEFFDSHNQLQ 495
            ::|:..|    :.||::...|...|..|..:.| .||...||....:  :..||..|.::::..:
 Frog   230 SMMSSES----KFLFRKNYAKYEFFKNPVNFFP-EQMVAWCQQSNGSIPQSQLLQNFLNANSCPE 289

  Fly   496 MDGPLYMKADPKKGWKRYHFVLRSSGLYYFPKEKTKNTRDLACLNLFHGHNVYTGLGWRKKWKSP 560
            :.|.||:|...||.||:....||.||||...|..:|..|.|..::.....|:|:.:..:|.:.:|
 Frog   290 IQGFLYVKEVGKKSWKKLFVCLRRSGLYCSTKGMSKEPRHLQGISDLEDSNIYSLISCKKLYNAP 354

  Fly   561 TDYTFGFKAVGDSSLGKSCRSLKMLCAEDLPTLDRWLTAIRVCKYGKQLWDSH------------ 613
            ||  ||| .|..:.:....:.|:.|||||..:...|:||.|:.|||..|:.::            
 Frog   355 TD--FGF-CVKPNKVRNEVKELRFLCAEDEQSRTCWMTAFRLLKYGMLLYQNYRIPQQKKSLHTN 416

  Fly   614 -----KSLLEDLCLSRD----------------DAVSQSSFAASMRSESISSISSAVPSQCGSVS 657
                 :|:.|:..::.|                .|..:...|...||..::.:.|..|....::|
 Frog   417 FSTPVRSVSENSLVAMDFSGQTGRVIENPVEAQSAAMEEGHAWRKRSSRLNVLGSQSPLHPSTLS 481

  Fly   658 SAISSMSNSTSGRTSRASSSSSSGCLSDDNNAFDSEFTTGTIKRKPSMKPNLPLTTMTRQLK-EV 721
            :.|....:...||.||..|.:    :.......|..|    :.|.....|...:.|:....| :.
 Frog   482 TVIHRTQHWFHGRISREESQT----IIKQQGLVDGLF----LLRDSQSNPKAFVLTLCHHQKIKH 538

  Fly   722 GEITICESAG 731
            .:|..||..|
 Frog   539 FQILPCEDDG 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
picoNP_608363.1 RA_MRL_MIG10 366..451 CDD:340555 28/86 (33%)
PH_APBB1IP 489..614 CDD:269961 42/141 (30%)
grb10XP_012819769.1 RA_GRB10 161..252 CDD:340558 30/94 (32%)
PH_APBB1IP 283..405 CDD:269961 42/124 (34%)
BPS 422..465 CDD:462644 7/42 (17%)
SH2_Grb10 484..591 CDD:198278 16/73 (22%)

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