DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nup205 and EMB3142

DIOPT Version :9

Sequence 1:NP_728308.1 Gene:Nup205 / 33002 FlyBaseID:FBgn0031078 Length:2090 Species:Drosophila melanogaster
Sequence 2:NP_001332447.1 Gene:EMB3142 / 835195 AraportID:AT5G51200 Length:1863 Species:Arabidopsis thaliana


Alignment Length:2248 Identity:452/2248 - (20%)
Similarity:816/2248 - (36%) Gaps:647/2248 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 DLEQCLKKYKHNFSNLLRNPPRSEKSRNLLRN---ALNEGVPMQGHSRKTKMSQDLADEAVILSD 116
            :|...::....:..|||..||.....|..:::   .|.:.:|:      :...||:| .::.|||
plant    28 ELTHAIRNSFPSLQNLLSFPPPKPSDRAQVQSKEIRLPDSLPI------SLDDQDIA-ISLKLSD 85

  Fly   117 MFDLDEGFAVELLCTAQRQ---QKHHPGLSRGLVAVLLYYDGRKAISCTLRDMFQ-VVSGVSWNT 177
            ...|:|..:|.||.::.::   ....| |....:|..|:|.||:.::.||..:.: ||.......
plant    86 ELHLNEIDSVRLLVSSNQEWGLMGRDP-LEIQRLATGLWYTGRRDLTSTLYTLLRAVVLDEGLEP 149

  Fly   178 ELPKEITGLVTNYAESLVDGSGILGRLLQLLEEMDVDKECAMLTTNRAFGSKKHQNQVLGLYEDI 242
            :|..:|.||:    |.|:: :|:..||:.|::|::.:....:       |....:..::    |.
plant   150 DLIADIQGLL----EELIE-AGLRQRLITLIKELNREDPTGL-------GGPLCERYLI----DS 198

  Fly   243 QQALAMALFNWSAQRGLPRHIAIRLMHQLANRKNHDAGGNMD--DVTLIM---LMALLYAYDT-- 300
            :.||.       .:|.:.:...:.|.|.|......|..|:.|  |:..|:   ...|....||  
plant   199 RGALV-------ERRAVVQRERLILGHCLVLSILVDRPGSKDVKDIYYILKDNAAQLTEGNDTIS 256

  Fly   301 -----SML--LVTEEPNEHTTRLP-----IFSDREFAECFLEELYAQSSWQAPRLNAIIAYSFGL 353
                 |:|  |:....::..:||.     |..|..|...|.:.:.|..|  .|..:..|.   |:
plant   257 SQITFSLLFSLIITFVSDAISRLSDKSSMISQDASFRTDFQDIVMASGS--DPTADGFIG---GI 316

  Fly   354 TLASLRHAPLQLQATA----ISIINRDEM-----LIDEALGAQVFVFFHSLLL--------EKDL 401
            .||...|..|.....:    ||..:..:|     .::......||.|....:|        |:|:
plant   317 RLAWAVHLMLIHDGISGMDTISTASTTDMGHICSCLESIFSKNVFQFLLDNVLRTAAYQNDEEDI 381

  Fly   402 VYSTQFFYRRVHLLITDFIDFMNSKVSELRGRADESSHTIISFLNEGLEPPPNLDSN-------- 458
            :|   .:...:|.|.:.|:....:     |.:..||....:|.||......| ||.:        
plant   382 IY---IYNAYLHKLASCFLSHPIA-----RDKVKESKDMAMSVLNSYRTSDP-LDGSMQTEESDR 437

  Fly   459 ---FELLMLCVAKMH-GDPRVTIRLCNEYWGPGDPNGSTAFKNTSRSVSLFKFISLASDLLPQTL 519
               |..||..|:|:: .:|.:                      .|.:..|:.|::.|.:  ..|.
plant   438 PLPFISLMEFVSKIYQKEPEL----------------------LSGNDVLWTFVNFAGE--DHTN 478

  Fly   520 FK---AYLKMISGLTRTDFSARCAFNMLRVPQMATGGKY-AVSWDHFFTTLGNYYTSMRNDFNTN 580
            ||   |:|:|:..|..|...|...:.:||      |..: ::.|...|..:..|....:....|.
plant   479 FKTLVAFLEMLCTLASTQEGASKVYELLR------GTSFRSIGWPTLFDCIRIYDEKFKQSLQTA 537

  Fly   581 IGMSGETIYRTRSTPKAITQREAEHLVAVMGIIQAVAEHDEVSRIMICDHPNWQTPQV-----LL 640
            ..|..|.:           :.:|:.|||.:.::|.|.|:...:     :..|| .|.:     ||
plant   538 GAMMPEFL-----------EGDAKALVAYLNVLQKVVENGNPT-----ERKNW-FPDIEPFFKLL 585

  Fly   641 GLVACATPLFLKAEILHTLAALAK-SKETARVIWFHLE--------ASQIIPTVPVSRSYAQCSL 696
            |..  ..|.:||..:..|:||... ..|....||..||        .||:..:...|:.|   .:
plant   586 GYE--NIPPYLKGALRKTIAAFVNVFPEMRDSIWAFLEQYDLPVVVGSQVGKSDQSSQVY---DM 645

  Fly   697 LEEMEQIESRSEQYNLTRGILQLLYTLMTTNLPKSLGAGQ-----RTPAYEGYLKSMINSVLLKF 756
            ..|:.::|:|.|||..|...|.|:..|:         ||:     |...:.|..:.:.:.|...|
plant   646 QFELNEVEARREQYPSTISFLNLINALI---------AGEKDVNDRGRRFIGIFRFVYDHVFTPF 701

  Fly   757 YNRAYKVPSEKWQVGAQCLKLLYYLLATYRPSAMDFLETVDEPPYPGF--HVMMQLQLKSEMLQL 819
            ..|||..|.||||:...||:..:.:|:.|         .:.|....||  |....:.|::..||.
plant   702 PQRAYSDPCEKWQLVVACLQHFHMILSMY---------DIQEEDLDGFTEHPHFLVSLETSSLQT 757

  Fly   820 LLCIVEEVRERLDN---YNRFQG------------------KKLLEECSLYALLILEAALAKQNA 863
            .|.|:|.:::.:..   |....|                  .|:||:....:|.||.....|.  
plant   758 QLPIIELLKDFMSGKALYRNLMGILQVGVNSIISERLSKTYGKILEKAVQLSLEILLLVFEKD-- 820

  Fly   864 FFEAHSAANCPILLSGLNRML---LDLNPRSRKPDHVLNIIKYVTYNSWLPRHALAAIKILASVT 925
                       :|:|.:.|.|   ||: ..|:..:.::.:::||.|:| ||:...::|||:    
plant   821 -----------LLVSDVWRPLYQPLDI-ILSQDHNQIIALLEYVRYDS-LPQIQRSSIKIM---- 868

  Fly   926 QLPNV-STQILSMYGQGSNEKLEIRQGFVECLEMEVCVGKHDDDLLDQLALNNHVPYLGFGDDLD 989
               |: |::::.:                                         ||.|       
plant   869 ---NILSSRLVGL-----------------------------------------VPML------- 882

  Fly   990 NEREMSGEREYSTIESQLELQAGDGALESKPASIELQLKEA-------------IIKLFEMNLSQ 1041
                             :::.|.:..:|...|.:|.:|:|.             |::|...|:::
plant   883 -----------------IKIDAANSLIEDYAACLEGRLEEGEVVENSCDDLGVLIMQLLVDNINR 930

  Fly  1042 QLPNFVYFLLGVDVLREFMANGRQHLAIEMQSSCVNSVVLLLEKYMDKQRHSDKYCEHTARIVER 1106
            ..|:..:.||..|:  :....|.. |..:...||:..::.:|||..:.        :....:.|.
plant   931 PAPSITHLLLKFDL--DAPVEGTV-LQPKFHYSCLKVILEMLEKLPNP--------DINFLLFEF 984

  Fly  1107 IYHLFHGLCANRRTAETILRYFRLTCSDFLLRHL-----RSLPFR---QHREDHVLHAMGHLLNC 1163
            .:.|...|..:..|:...:.........|.|:||     .:||.|   |......||....||..
plant   985 GFQLLCELNLDPLTSGPTMDLLSSKKYQFFLQHLDTIGVATLPKRSGSQALRISSLHQRAWLLKL 1049

  Fly  1164 VSIDVKLAAKHGQMTRFNQMCDILLIGNGMERSSHGLSMELGHSLISQPSSSFLAMDVLPAGGSI 1228
            ::|  .|....|..:...:.|..:|        ||....|:..:.....|||....|        
plant  1050 LAI--ALHTGSGSSSAHLEACQSIL--------SHLFGREVTEAANEPFSSSTYPQD-------- 1096

  Fly  1229 SAVAHGAGSASLGAPNTGVKSLKPSLLQETSQGLHVTRLLDILVLEA--GTLSQPQLEF---FDG 1288
                        |....|..|:..|         ....||:||...:  .::..||:..   :|.
plant  1097 ------------GLDYAGTSSISKS---------KALALLEILQFRSPDASMQLPQIVSSLKYDS 1140

  Fly  1289 HLITQLL--RDCEAS------AEAGANSRANLINV----RKLYYILTDELYMVQSIIASGQRKAI 1341
             |:..:|  ||...|      :|.|    ..||::    .||:..|.....:|.|.....:...:
plant  1141 -LVEDILGNRDTSVSGSIYYYSERG----DRLIDLSSFSNKLWQKLHSGFPLVDSFPNVAELSEV 1200

  Fly  1342 STEIMLLLNHAVNINRVRTQRCATLAFMAAWGQLVQVLFSNMPDAVLPATQRRQHIIDIVEKVLI 1406
            ...|..||......||...::.|.|..:|.|.|:|:|           :..||...:|...::|.
plant  1201 RETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEV-----------SACRRISSLDNRSEILY 1254

  Fly  1407 KVQPIQPIIEISVQVS--------------ETVLLLLANLRYCCYQAEDQSPEDLAAEDSLS-NG 1456
            :      |::.|:..|              :..|..:|.||                :|..| .|
plant  1255 R------ILDASLSASASPDCSLKMAFVLTQVALTCIAKLR----------------DDRFSFQG 1297

  Fly  1457 NGNAIGNDSQVNALCLGQRAIGTGSDGGSGGGRDIGSGGNSSNLRFILKNLVQWIMISEVKSQKL 1521
               |:.:|:   ..||....:           :.:.:|...|    :|..||..|:..| .|:.|
plant  1298 ---ALSSDT---VTCLDVMMV-----------KHLSTGACHS----VLFKLVMAILRHE-SSESL 1340

  Fly  1522 RINLYSSLLNCLRIAKRLRTDEHL--------EYQETLISRQE----SARTYNKEQRRDDRLRLK 1574
            |...|:.||:..:..      :|:        ..|..|::.|:    ..:..:|||....|....
plant  1341 RRRQYALLLSYFQYC------QHMIALDVPTSVVQFLLLNEQDGEDLDIQKIDKEQADLARANFF 1399

  Fly  1575 AMAAEVIGTFGEKLIDTICHDAVTGHDVCRML------ALACLD----MISELQAVSTLCDFVAS 1629
            .:..|..|     ::|.:..||..|.:..:.:      ||.|:|    .:|:||          |
plant  1400 IIKKEAQG-----ILDLVIKDASQGSEFGKTISLYVLEALVCIDHERYFLSQLQ----------S 1449

  Fly  1630 RGYLK---------------HILESLDQSSTALCGILQPVPDHLRPLYVYESRMAFLTRMAN--S 1677
            ||:::               |:|||..::.|                  .|:.:|.|.|:::  .
plant  1450 RGFIRSCLGSISNISYQDGTHLLESQQRACT------------------LEAELALLLRISHKYG 1496

  Fly  1678 NVGARLLLTEQALGVLSNMKVYD-----QQPDLK-SSELNRNEPQTFLPSIDDRFRSILLPALSL 1736
            ..|.::|.:..||..:::.:...     ::.|:| .|::..|.         .:.|:|:...|.|
plant  1497 KSGGQVLFSMGALEHIASCRAISFKGNMRRVDMKLQSDVGYNV---------QKQRTIITAVLRL 1552

  Fly  1737 CDAIVNSLGPR-----NNSAAVQVLNFLFAHIDMVEAMLRSATPYMDLGHLQQVAVISNLFARAS 1796
            ..|:.:.:...     .|.....|:.|:..|..:.:.:||......|...::|:.:...:.::..
plant  1553 VFALTSLVETSEFFEGRNKIVRDVVEFIKGHQSLFDQLLREDFTQADDLLMEQIILAVGILSKVW 1617

  Fly  1797 THELTALEDSVQLDLRNRLGRVQQLMIVVFGRFCVSEPTIRRMLQQDEEQQTNPTDDSKRLRVK- 1860
            ..|           ..:..|.||.|..:: .:..::.|....:.|:..|.:.:      :||.. 
plant  1618 PFE-----------ENDGYGFVQGLFDMM-SKLFIASPIKSILSQKGSELKLS------QLRFSL 1664

  Fly  1861 ----YFLDIAANVSLYCRNVVTSHSKDSMT-----SKYLLTTVINDVTLLTGKMSSKKLTTIMHT 1916
                ||| :..| ||  |..|:..|.||.|     :..||.::::.||....:.:.|| :.::|.
plant  1665 TSYLYFL-VTKN-SL--RLQVSDDSLDSSTKLRQPTLLLLASLLSHVTDSLERAAEKK-SLLLHK 1724

  Fly  1917 I--LNQLK-----GSIGYYLSQKSI--ADNLLQQRASLPNISFGPNGKQSYIELSQRYNEKRSEL 1972
            |  :|:|.     ..|....||:.:  :||:.::|..            :.:|:.|....:...:
plant  1725 IRDINELSRQDVDAIIKICDSQEYVTPSDNIHKRRYI------------AMVEMCQIVGNRDQLI 1777

  Fly  1973 RQAVFIAEQNLYLLWIHLDFYLRNTIDYANENRNAINESNMDDDNDMSVLNASQEEIVQLKQLLI 2037
            ...:.:||..|.::.||    |::....:||..:..::|::            |:|:..|...|.
plant  1778 TLLLQLAEHVLNIILIH----LQDRSVSSNERGSYGSKSHI------------QQEVTDLCGKLS 1826

  Fly  2038 STFNETFCTQLINASEDYSIKCKGFNGSLLRRIKALVQ 2075
            .|.:.   ..|:|..:      .|.|..:.:|:...|:
plant  1827 PTIDR---LALLNEGK------VGHNLKVFQRLATTVK 1855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup205NP_728308.1 Nup192 32..1796 CDD:314723 392/1948 (20%)
EMB3142NP_001332447.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1835
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45971
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D90119at2759
OrthoFinder 1 1.000 - - FOG0004958
OrthoInspector 1 1.000 - - oto3935
orthoMCL 1 0.900 - - OOG6_103030
Panther 1 1.100 - - LDO PTHR31344
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.910

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