DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup205 and AT5G43230

DIOPT Version :10

Sequence 1:NP_728308.1 Gene:Nup205 / 33002 FlyBaseID:FBgn0031078 Length:2090 Species:Drosophila melanogaster
Sequence 2:NP_199137.2 Gene:AT5G43230 / 834341 AraportID:AT5G43230 Length:848 Species:Arabidopsis thaliana


Alignment Length:256 Identity:57/256 - (22%)
Similarity:87/256 - (33%) Gaps:67/256 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1012 GDGALESKPASIELQLKEAIIKLFEMNLSQQLPNFVYFLLGVDVLREFMANGRQHLAIEMQSSCV 1076
            |:|:..||.|:........:| |........:|...::|....|||..::.|.:.:.|..:.:..
plant   416 GNGSDHSKRATAARAAVSGLI-LVSKACGNDVPRLTFWLSNSIVLRAILSRGMEKMKIVPEKAGS 479

  Fly  1077 N------SVVLLLEKY----------------MDKQRHSDKYCEHTARIV---ERIYHLFHGLCA 1116
            :      :.:..|||:                |.....|.......||.|   .|:.|...||.|
plant   480 DEWEDPRAFLAALEKFESWIFSRVVKSVWWQSMTPHMQSPAVKGSIARKVSGKRRLGHRNQGLYA 544

  Fly  1117 NRRTAETILRYFRLTCSDFLLRHLRSLPFRQHREDHVLHAMGHLLNCVSIDVKLAAKHGQMTRFN 1181
                .|.....||..|.       |..|.|..|::         ..|:.:..||.     |.:..
plant   545 ----IELWKNAFRAACE-------RLCPLRGSRQE---------CGCLPMLAKLV-----MEQLI 584

  Fly  1182 QMCDILLIGNGMERSSHGLSMELGHSLISQPSSSFLAMDVLPAGGSISAVAHGAGSASLGA 1242
            ...|:.:. |.:.|.|.|   |:....:|.|.|.   ::|||.         .||.||.||
plant   585 SRLDVAMF-NAILRESAG---EMPTDPVSDPISD---INVLPI---------PAGKASFGA 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup205NP_728308.1 Nup192 182..1795 CDD:463387 57/256 (22%)
AT5G43230NP_199137.2 NT-C2 13..156 CDD:463058
Blue background indicates that the domain is not in the aligned region.

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