DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup205 and AT5G06930

DIOPT Version :10

Sequence 1:NP_728308.1 Gene:Nup205 / 33002 FlyBaseID:FBgn0031078 Length:2090 Species:Drosophila melanogaster
Sequence 2:NP_196310.2 Gene:AT5G06930 / 830584 AraportID:AT5G06930 Length:723 Species:Arabidopsis thaliana


Alignment Length:133 Identity:35/133 - (26%)
Similarity:58/133 - (43%) Gaps:17/133 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   913 HALAAIKILASVTQLPNVSTQILSMYGQGSNEKLEIRQGFVECLEMEVCVGKHDDDLLDQLALNN 977
            |:.|...:.:|.:|...:|.  .|.|....|.|.......|:....|  .||.||:..|  |||:
plant   172 HSTARKTVRSSKSQAKALSD--FSSYRSSENNKAFSSASPVDSTPFE--EGKEDDEFED--ALNS 230

  Fly   978 -HVPYLGFGDDLDNEREMSGEREYSTIESQLELQAGDGALESKPASIELQLKEAIIKLFEMNLSQ 1041
             |      .::.|||..:..|::.|.:|..|..:.  ..:|::...:|.:|:|  :...||:|..
plant   231 VH------NNESDNETLVYKEKKRSDVEKVLAQKI--ETMEARIEKLEEELRE--VAALEMSLYS 285

  Fly  1042 QLP 1044
            ..|
plant   286 VFP 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup205NP_728308.1 Nup192 182..1795 CDD:463387 35/133 (26%)
AT5G06930NP_196310.2 Prefoldin <223..275 CDD:471851 15/61 (25%)
coiled coil 249..275 CDD:467478 6/27 (22%)

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