DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup205 and AT3G57780

DIOPT Version :10

Sequence 1:NP_728308.1 Gene:Nup205 / 33002 FlyBaseID:FBgn0031078 Length:2090 Species:Drosophila melanogaster
Sequence 2:NP_191337.2 Gene:AT3G57780 / 824947 AraportID:AT3G57780 Length:671 Species:Arabidopsis thaliana


Alignment Length:207 Identity:46/207 - (22%)
Similarity:73/207 - (35%) Gaps:58/207 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 ELVETISVEKGIVLSGEA--------WSSSDK------IYNVDYLFVG---HSGNMALTDLLRFN 193
            :|.|||..|.|.....||        .....|      .||....|..   .:...|..|::|..
plant    52 QLTETIQTEPGSRFHDEAPGPPGVPETDGQQKEMEELDTYNGKLAFEACEMRARIQAQEDVMRIQ 116

  Fly   194 NRIVFLDRVSISNHTIRNFLQVLKKSNSQLEVLTIRDSWEGSWDPIVVLEGLNAQEWSPEHRPQK 258
            |     .|::..:||:.:  |:.:| |..|:.|        :|  ||.......:::...|| ||
plant   117 N-----TRMADLSHTLES--QINQK-NQLLDDL--------AW--IVATNADLKEDYDHVHR-QK 162

  Fly   259 FSLKSSHSK---SLLKIQQHFYPKQKDSLANGIDLTEAYDFIRDDGIRVSVLFREAKLQVFVWSQ 320
            ..|::.:..   :||.|......::.....|..:|.:.               |:.:|    |.:
plant   163 QGLEAEYQSKVVALLAITDDIMKRKAADAENQNELNDR---------------RKEEL----WRR 208

  Fly   321 EEKKLERKRRSS 332
            ..||..||..||
plant   209 HCKKALRKCVSS 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup205NP_728308.1 Nup192 182..1795 CDD:463387 34/154 (22%)
AT3G57780NP_191337.2 DIL <458..547 CDD:460359
Blue background indicates that the domain is not in the aligned region.

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