DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup205 and AT3G01810

DIOPT Version :10

Sequence 1:NP_728308.1 Gene:Nup205 / 33002 FlyBaseID:FBgn0031078 Length:2090 Species:Drosophila melanogaster
Sequence 2:NP_186830.1 Gene:AT3G01810 / 821073 AraportID:AT3G01810 Length:921 Species:Arabidopsis thaliana


Alignment Length:1124 Identity:210/1124 - (18%)
Similarity:376/1124 - (33%) Gaps:363/1124 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   883 MLLDLNPRSRK-----PDHVLNI--IKYVTYNSWLPRHALAAIKILASVTQLPN----------V 930
            |:|.|:.::|:     .|::::|  ||     .|.|..:|.:::  :.|.|..|          |
plant     1 MVLGLSSKNRRCSSVQVDYLIHIHDIK-----PWPPSQSLRSLR--SVVIQWENGDRNSGTTSVV 58

  Fly   931 STQILSMYGQGSNEKLEIRQGFVECLEMEVCVGKHDDDLLDQLALNNHVPYLGFGDDLDNEREMS 995
            :..:.|:.|:|   |:|..:.|..                 .|.|...|...|.|.|:       
plant    59 APSLGSVIGEG---KIEFNESFKL-----------------PLTLLKDVSARGKGGDV------- 96

  Fly   996 GEREYSTIESQLELQAGDGALES-----KPASIELQ----LKEAIIKLFEMNLSQQLPNF---VY 1048
                  ..::.|||...:...|.     ..|:|:|.    :||:.....:||..:...|.   |.
plant    97 ------FFKNVLELNLYEPRREKTHQLLATATIDLAVYGVVKESFSLTAQMNSKRSYRNATQPVL 155

  Fly  1049 FLLGVDVLREFMANGRQHLAIEMQSSCVNSVVLLLEKYMDKQRHSDKYCEHTARIVERIYHLFHG 1113
            :|....|.|.           ...||.:||:       .|:.::..   |..:.::...|:....
plant   156 YLTIQPVSRR-----------RASSSSMNSL-------KDEAKNGG---ESVSALMNEEYYKEAE 199

  Fly  1114 LCANRRTAETILRYFRLTCSDFLLRHLRSLPFRQHREDHVLHAMGHLLNCVSIDVKLAAKHGQMT 1178
            :.:  .|.:.|..:..||.|...|........|...|:|                         .
plant   200 IAS--ITDDDISSHSSLTVSSSTLESNGGFSVRTEEEEH-------------------------E 237

  Fly  1179 RFNQMCDILLIGNGMERSSHGLSMELGHSLISQPSSSFLAMDVLPAGGS---ISAVAHGAGSASL 1240
            |.|:...    |||.|||..          :|:.....:| |.:|:..|   :|:|.|.....|.
plant   238 RINKNPR----GNGHERSKS----------VSESRQRQIA-DQIPSRSSSVDLSSVFHLPEGISD 287

  Fly  1241 GAPNTGVKSLKPS---LLQET-------SQGLHVTRLLDILVLEAGTLSQ---PQLEFFDGHLI- 1291
            .||||.:..|:..   .:.:|       |.|.|.......:.|:...||:   |:.......|. 
plant   288 SAPNTSLSGLEHCANVFITDTNESSKLASNGQHNNGEAKSVPLQIDNLSENASPRASVNSQDLTS 352

  Fly  1292 ----------TQLLRDCEASAEAG-ANSRANLINVR---KLYYILTDELYMVQSIIASGQRKAIS 1342
                      ::.::...:|.:.. :|||.:|.:.|   |:|...|.:..:...|          
plant   353 DQEPESIVEKSRKVKSVRSSLDINRSNSRLSLFSERKEAKVYPNSTHDTTLESKI---------- 407

  Fly  1343 TEIMLLLNHAVNINRVRTQRCATLAFMAAWGQLVQVLFSNMPDAVLPATQ--------------- 1392
                  .|....:.::..:.|...|..||...:|....|:......||.:               
plant   408 ------KNLESRVKKLEGELCEAAAIEAALYSVVAEHGSSSSKVHAPARRLLRLYLHACRETHLS 466

  Fly  1393 RRQHIIDIVEKVLIKVQPI--QPIIEISVQVSETVLL--LLANLRYCCYQAEDQSPEDLAAEDSL 1453
            ||.:..:.....|:.|...  ..:..::..:|.|::|  ::::.     .||::.|        :
plant   467 RRANAAESAVSGLVLVAKACGNDVPRLTFWLSNTIVLRTIISDT-----SAEEELP--------V 518

  Fly  1454 SNGNG--------------NAIGNDSQVNALCLGQRAIGTGSDGGSGGGRDIGS-GGNSSNLRFI 1503
            |.|.|              :....||.::.                   :||.| |.....:.||
plant   519 SAGPGPRKQKAERETEKRSSLKWKDSPLSK-------------------KDIKSFGAWDDPVTFI 564

  Fly  1504 --LKNLVQWIMISEVKS---QKLRINLYSSLLNCLRIAKRLRTDEHLEYQETLISRQESARTYNK 1563
              |:.:..||....|:|   |.|...:.||..:.....|.              :...|.:|:. 
plant   565 TALEKVEAWIFSRVVESIWWQTLTPRMQSSAASTREFDKG--------------NGSASKKTFG- 614

  Fly  1564 EQRRDDRLRLKAMAAEVIGTFGEKL--------IDTICHDAVTGHDVCRMLALACLDMISEL--- 1617
                    |..:...:.:|.|..:|        .:.:|....:||: |     .||.:.:.|   
plant   615 --------RTPSSTNQELGDFSLELWKKAFREAHERLCPLRGSGHE-C-----GCLPIPARLIME 665

  Fly  1618 QAVSTLCDFVASRGYLKHILESLDQSSTALCGILQPVPDHLRPLYVYESRMAFLTRMANSNVGAR 1682
            |.|:.| |.......|:   :|.|...|      .||.|.:..|.|    :...:|.::...||:
plant   666 QCVARL-DVAMFNAILR---DSDDNFPT------DPVSDPIADLRV----LPIPSRTSSFGSGAQ 716

  Fly  1683 LLLTEQALG----VLSNMKVYDQQPDLKSSELNRNEP--QTF--LPSIDDRFRSILLPALSLCDA 1739
            |   :.::|    .|:::...|.:.|..|.|.:..|.  :||  |.::.|   .::||.    |.
plant   717 L---KNSIGNWSRWLTDLFGIDDEDDDSSDENSYVEKSFKTFNLLKALSD---LMMLPK----DM 771

  Fly  1740 IVNS-----LGPRNNSAAV-QVL-NFL---FAHIDMVEAMLRS--------------------AT 1774
            ::||     :.|...:..: :|| ||:   |....:.:|:|:|                    :.
plant   772 LLNSSVRKEVCPMFGAPLIKRVLNNFVPDEFCPDPVPDAVLKSLESEEEAEKSIITSYPCTAPSP 836

  Fly  1775 PYMDLGHLQQVAVISNLFARASTHELTALEDSVQLDLRNRLGRVQQLMIVVFGRFCVSEPTIRRM 1839
            .|..........:|.| |.:....:|:.:..|:..........:.:|          |.|....:
plant   837 VYCPPSRTSISTIIGN-FGQPQAPQLSRIRSSITRKAYTSDDELDEL----------SSPLAVVV 890

  Fly  1840 LQQDEEQQTNPTDDSKRLR 1858
            |||...::.|..|..:.:|
plant   891 LQQAGSKKINNGDADETIR 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup205NP_728308.1 Nup192 182..1795 CDD:463387 199/1059 (19%)
AT3G01810NP_186830.1 NT-C2 14..160 CDD:463058 37/185 (20%)

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