DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nup205 and Nup205

DIOPT Version :9

Sequence 1:NP_728308.1 Gene:Nup205 / 33002 FlyBaseID:FBgn0031078 Length:2090 Species:Drosophila melanogaster
Sequence 2:XP_038963704.1 Gene:Nup205 / 362335 RGDID:1309413 Length:2049 Species:Rattus norvegicus


Alignment Length:2137 Identity:632/2137 - (29%)
Similarity:1048/2137 - (49%) Gaps:233/2137 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MWTPYKHLYNTFQTAVSNRSGFTSD-LEQCLKKYKHNFSNLLRNPPRSEKSRNLLRNALNEGVPM 94
            :|.|||.::.|...|:..|...... |:..|||:|.:|.:|.:|||::.:....::.|.:|||.:
  Rat    54 LWGPYKDIWQTVGNALWRRQPEAVHLLDMILKKHKPDFISLFKNPPKNVQQHEKIQKASSEGVAI 118

  Fly    95 QGHSRKTKMSQDLADEAVILSDMFDLDEGFAVELLCTAQRQQKHHPGLSRGLVAVLLYYDGRKAI 159
            ||......:.:.|..||.|:||:||:.|..|||||...:.||.|.|||:|||||||||:||::.|
  Rat   119 QGQQGTRLLPEQLIKEAFIISDLFDIGELSAVELLLAGEHQQPHFPGLTRGLVAVLLYWDGKRCI 183

  Fly   160 SCTLRDMFQVVSGVSWNTELPKEITGLVTNYAESLVDGSGILGRLLQLLEEMDVDKECAMLTTNR 224
            :.:|:.:.|...|.:|..||..|:..:.|.:.:.|:: .|:..::|.|:.::||:.|...|..:|
  Rat   184 ANSLKTLIQSRRGKTWTLELSPELVSMTTRFTDELME-QGLTYKVLTLVSQIDVNNEFEKLQRDR 247

  Fly   225 AFGSKKHQNQVLGLYEDIQQALAMALFNWSAQRGLPRHIAIRLMHQLANRKNHDAGGNMDDVTLI 289
            ..||:||:.:|..|.::.:|:||.:||.|:.|..|.:...:.|:..| .|...:|.|::|.|.|.
  Rat   248 GLGSEKHRKEVSDLIKECRQSLAESLFAWACQSPLAKDDTLLLIGHL-ERVTVEANGSLDAVNLA 311

  Fly   290 MLMALLYAYDTSML-LVTEEPNEHTTRLPIFSDREFAECFLEELYAQSSWQAPRLNAIIAYSFGL 353
            :||||||.:|||.: ..|||.::....||:.::|::.......|.....|:.|.|.|.:..::.|
  Rat   312 LLMALLYCFDTSFIEQSTEERDDMIHHLPLLTERQYIATIHSRLQDSQPWKLPGLQATVRLAWAL 376

  Fly   354 TLASLRHAPLQLQATAIS-IINRDEMLIDEALGAQVFVFFHSLLLEKDLVYSTQFFYRRVHLLIT 417
            .|..:...|   ..||:: ....||.:.:.|:...||:|....::..:..|..:|:.||:|.|||
  Rat   377 ALRGISQLP---DVTALAEFTEADEAIAELAIADNVFLFLSESVVLAENFYQEEFYIRRIHNLIT 438

  Fly   418 DFIDFMNSKVSELRGRADESSHTIISFLNEGLEPPPNLDSNFELLMLCVAKMHGDPRVTIRLCNE 482
            ||:.||..||.:|:.||||.:..|...:..|.|||.:|..:.|.|||.:.:::......:.|..|
  Rat   439 DFLAFMPMKVKQLKNRADEDARMIHMSIQMGNEPPISLRRDLEHLMLLIGELYKKNPFHLELALE 503

  Fly   483 YWGPGDP----------NGSTAFKNTSRSVSLFKFISLASDLLPQTLFKAYLKMISGLTRTDFSA 537
            ||.|.:|          .|....:...|.|.|.||:....||||.|::..||||:.||......|
  Rat   504 YWCPSEPLQTPTVMGSYLGVAHQRPPQRQVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCA 568

  Fly   538 RCAFNMLR------VPQMATGGKYAVSWDHFFTTLGNYYTSMRNDFNTNIGMSGETIYRTRSTPK 596
            ...|::|:      |..:...|...|||:|||.:|..|:..:|.|.     .|.:::.......:
  Rat   569 HYCFSLLKVNGSSHVENIQGAGGSPVSWEHFFHSLLLYHEHLRKDL-----PSADSVQYRHLPSR 628

  Fly   597 AITQREAEHLVAVMGIIQAVAEHDEVSRIMICDHPNWQTPQVLLGLVACATPLFLKAEILHTLAA 661
            .|||:|.:.|:|.:.:...:....|.:|:.:|:||.|....|:|||:.|:.|..||||:|.||||
  Rat   629 GITQKEQDGLIAFLQLTSTIITWSENARLALCEHPQWTPVVVILGLLQCSIPPALKAELLKTLAA 693

  Fly   662 LAKSKETARVIWFHLEASQIIPTVPVSRSYAQCSLLEEMEQIESRSEQYNLTRGILQLLYTLMTT 726
            ..||.|.|..:|..||.:||:.||.|........:..|:.:||||.|:|.|||...||:.||:.:
  Rat   694 FGKSPEIAASLWQSLEYTQILQTVRVPSQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLVES 758

  Fly   727 NLPKSLGAGQRTPAYEGYLKSMINSVLLKFYNRAYKVPSEKWQVGAQCLKLLYYLLATYRPSAMD 791
            :.|.:||||.|.|.::.||:.:.:||.|:|..|||:..:|||:|....|::.|.||..|.|...|
  Rat   759 SFPSNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQLED 823

  Fly   792 FL---------ETVDEPPYPGFHVMMQLQLKSEMLQLLLCIVEEVRERLDNYNRFQGKKLLEECS 847
            |:         |.:...| |||.:|..|..:|.||:|.|.::||..::||.|..|.|||.||:..
  Rat   824 FVDQFVELQGEEIIAYKP-PGFSLMYHLLNESPMLELALSLLEEGVKQLDTYAPFPGKKHLEKAV 887

  Fly   848 LYALLILEAALAKQNAFFEAHSAANCPILLSGLNRMLLDLNPRSRKPDHVLNIIKYVTYNSWLPR 912
            .:.|.:|...|.|:|.|.:....:...:::|.|.::|..:|||::|.|:|:||.:|:.:.:..|.
  Rat   888 QHCLALLNLTLQKENLFMDLLRESQLALIVSPLEQLLQGINPRTKKADNVVNIARYLYHGNSNPE 952

  Fly   913 HALAAIKILASVTQLPNVSTQILSMYGQGSNEKLEIRQGFVECLEMEVCVGKHDDDLLDQLALNN 977
            .|..:.|||..::...|:..:::..:....|...::..||||||:.|                  
  Rat   953 LAFESAKILCCISCNSNIQIKMVGDFTHDQNVSQKLMAGFVECLDSE------------------ 999

  Fly   978 HVPYLGFGDDLDNEREMSGEREYSTIESQLELQAGDGALESKPASIELQLKEAIIKLFEMNLSQQ 1042
                       |.|       |:..:|...|       ||.|.|:|..:.:..|:.|...:|.:.
  Rat  1000 -----------DTE-------EFVRVEEGSE-------LEKKLAAIRHETRIHILNLLITSLERS 1039

  Fly  1043 LPNFVYFLLGVDVLREFMANGRQHLAI-EMQSSCVNSVVLLLEKYMDKQRHSDKYCEHTARIVER 1106
            .||...:|||.::.:.......|...: ....:|:::::.:|||..| .|......:...::.|.
  Rat  1040 PPNLALYLLGFELKKPISTTNLQDPGVLGCPRTCLHAILNILEKGTD-GRSGPVAVQACPQLAEL 1103

  Fly  1107 IYHLFHGLCANRRTAETILRYFRLTCSDFLLRHLRSLPF-RQHREDHVLHAMGHLLNCVSIDVKL 1170
            .|.:.:.|||...|:...:||.| |..|||...|:.||| .:..|..:|:.|..|:...||::::
  Rat  1104 CYQVIYQLCACSDTSGPTMRYLR-TSQDFLFSQLQHLPFSNKEYEISMLNQMSWLMKTASIELRV 1167

  Fly  1171 AAKHGQMTRFNQMCDILLIGNGMERSSHGLSMELGHSLISQPSSSFLAMDVLPAGGSISAVAHGA 1235
            .:.:.|.:...::..:||....::..|.|   |.|....::..|.||..|               
  Rat  1168 TSLNRQRSHTQRLLHLLLDDLPVKPYSDG---EGGMEDENRSVSGFLHFD--------------- 1214

  Fly  1236 GSASLGAPNTGVKSLKPSLLQETSQGLHVTRLLDILVLEAGTLSQP-----QLEFFDGHLITQLL 1295
                     |..|               |.|.: :.:|::...||.     ||:|||...|.|::
  Rat  1215 ---------TATK---------------VRRKI-LSILDSIDFSQEIPEPLQLDFFDRAQIEQVI 1254

  Fly  1296 RDCEASAEAGANSRANLINVRKLYYILTDELYMVQSIIASGQRKAISTEIMLLLNHAVNINRVRT 1360
            .:||.....|    ..:.||:.|:.:|..|:..:|.:.|.|||..:..||..:|.:.|..|::..
  Rat  1255 ANCEHKNLQG----QTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEISTILQYVVGRNKLLQ 1315

  Fly  1361 QRCATLAFMAAWGQLVQVLFSNMPDAVLPATQRRQHIIDIVEKVLIKVQPIQPIIEISVQVSETV 1425
            ...|....:.:|.|||:::.:..|..::.|..|:..|.||::.|..||...:...|:...|:..|
  Rat  1316 CLHAKRHALESWRQLVEIILTACPQELIQAEDRQLIIRDILQDVHDKVLDDEAAQELMPVVAGAV 1380

  Fly  1426 LLLLANLRYCCYQAEDQSPEDLAAEDSLSNGNGNA----IGNDSQVNALCLGQRAIGTGSDGGSG 1486
            ..|.|:|.. ..:.|.:.|        |.:|...|    :.:.|..:|.....:.:|..|.|   
  Rat  1381 FTLTAHLSQ-AVRTEQKQP--------LVSGPAEAHYAFMLDSSFTSAPAAESQPVGFASIG--- 1433

  Fly  1487 GGRDIGSGGNSSNLRFILKNLVQWIMISEVKSQKLRINLYSSLLNCLRIAKRLRTDEHLE-YQET 1550
                      .|:|..|||.|:.:|:.:....|::|.:||.|||..|:||:|....:.|| .::|
  Rat  1434 ----------DSSLHIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPDEPDTLEAAKKT 1488

  Fly  1551 LISRQESAR-TYNKEQRRDDRLRLKAMAAEVIGTFGEKLIDTICHDAVTGHDVCRMLALACLDMI 1614
            :..|..:.. .::|.||.:       ||  :|.::|..|::.:|.||..||::.||||||.||.|
  Rat  1489 MWERLTAPEDVFSKLQREN-------MA--IIESYGAALMEVVCRDACDGHEIGRMLALALLDRI 1544

  Fly  1615 SELQAVSTLCDFVASRGYLKHILESLDQSSTALCGILQPVPDHLRPLYVYESRMAFLTRMANSNV 1679
            ..:........::::.||||.:::||.:....|..:|.|.|..|:.||.|||:||||||:|....
  Rat  1545 VSVDKQQQWLLYLSNSGYLKVLVDSLLEDDRTLQSLLTPQPPLLKALYTYESKMAFLTRVAKLQQ 1609

  Fly  1680 GARLLLTEQALGVLSNMKVYDQQPDLKS-SELNRNEPQTFLPSIDDRFRSILLPALSLCDAIVNS 1743
            |:..||....:..|:..:|||.:|::.| |.....:|..|:|:..||:|.||||||.||..|:.|
  Rat  1610 GSLELLRSGVIVRLAQCQVYDMRPEVDSHSMFGMRDPPIFIPTPVDRYRQILLPALQLCQVILTS 1674

  Fly  1744 LGPRNNSAAVQVLNFLFAHIDMVEAMLRSATPYMDLGHLQQVAVISNLFARAS----THELTA-L 1803
            ...::..||.|||.||.:|.|.::|:||...  :..|.||::|:::.:.::|:    .:||.. :
  Rat  1675 SMSQHLQAAGQVLQFLVSHSDTIQAILRCQD--VSAGSLQELALLTGIISKAALPGMLNELDVDV 1737

  Fly  1804 EDSVQLDLRNRLGRVQQLMIVVFGRFCVSEPTIRRMLQQDEEQQTNPTDD--SKRLRVKYFL-DI 1865
            .:...::|:..:.|.|:..:.:..||..|:     .|:|.:.|:.|...|  ||:..::..: .|
  Rat  1738 NEGSLMELQGHIARFQRQCLGLLSRFGGSD-----RLRQFKLQEDNVEGDRLSKKDEIELAMQQI 1797

  Fly  1866 AANVSLYCRNVVTSHSKDSMTSKYLLTTVINDVTLLTGKMSSKKLTTIMHTILNQLKGSIGYYLS 1930
            .|||..||.:.:..:|.:...:..|.|..:::.....|.....::..:.:..|..|  .|..||.
  Rat  1798 CANVMEYCHSFMQQNSPNLQNAVCLFTPSLSETVNRDGARQDTQVPVVPYWRLPGL--GIIIYLL 1860

  Fly  1931 QKSIAD------------NLLQQRASLP-----------------NISFGPNGKQSYIELSQRYN 1966
            ::|.:|            |.||....||                 .||.......:...|.:..|
  Rat  1861 KQSASDFFSYYDSHRRSVNKLQNVEQLPPDEIKELCQSVMPAGIDKISTAQKCVLARRRLVKLIN 1925

  Fly  1967 EKRSELRQAVFIAEQNLYLLWIHLDFYL-----RNTIDYANENRNAINESNMDDDN-DMS---VL 2022
            .:...|....:|.|..|::||.||::||     .::.|....:|..:....:.:.| |.|   :.
  Rat  1926 NRAKLLSLCSYIIETCLFILWRHLEYYLLHCTPMDSQDSLFASRTLLKSRRLQEPNLDFSRSGLA 1990

  Fly  2023 NASQEEIVQLKQLLISTFNETFCTQLINASEDYS-IKCK-GFNGSLLRRIKALVQFA 2077
            ..:|.:|.||:...|:.|.|:...:|::....|| ::.: .|..:|:|||:.|::.:
  Rat  1991 QVNQHDIDQLQSDAINAFGESLQKKLLDIEGLYSKVRSRYSFIQALVRRIRGLLRIS 2047

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup205NP_728308.1 Nup192 32..1796 CDD:314723 559/1805 (31%)
Nup205XP_038963704.1 Nup192 206..1725 CDD:403188 462/1558 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335628
Domainoid 1 1.000 789 1.000 Domainoid score I72
eggNOG 1 0.900 - - E1_KOG1835
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45971
Inparanoid 1 1.050 829 1.000 Inparanoid score I431
OMA 1 1.010 - - QHG53054
OrthoDB 1 1.010 - - D106148at33208
OrthoFinder 1 1.000 - - FOG0004958
OrthoInspector 1 1.000 - - oto96066
orthoMCL 1 0.900 - - OOG6_103030
Panther 1 1.100 - - LDO PTHR31344
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6064
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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