Protein Alignment SkpE and SKP1

DIOPT Version :9

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_010615.3
• Gene: SKP1 / 851928
• SGDID: S000002736
• Length: 194
• Species: Saccharomyces cerevisiae
• Alignment Length: 200
• Identity: 65/200 - (32%)
• Similarity: 91/200 - (45%)
• Gaps: 49/200 - (24%)

  Fly     1 MVTPTIKLESSEGVIFPTEVRVAMVSETIKTML----------------------DHFAVQN--- 40
            |||..:.|.|.||..|..:.::|..|..:|..|                      :|.:..|
Yeast     1 MVTSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNG 65

  Fly    41 ------DENAIVPLHSVSTFTLGKILAWANHHKD------DDDQSTEGEELKPRRPYAISPWDAI 93
                  |:..::|:.:|.:..|.|::.||.||:|      |||.|        |:...:..||..
Yeast    66 DDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDS--------RKSAPVDSWDRE 122

  Fly    94 FLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPEEIRFIFNIPEDVSPSVDGELR-- 156
            ||.|:...|.||||||..|.||.||:....|||.||||::|||||..|||..|.:|..:..:|
Yeast   123 FLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRE 187

  Fly   157 --WKD 159
              |.:
Yeast   188 NEWAE 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	SKP1	3..156	CDD:227528	61/189 (32%)
		BTB	6..114	CDD:295341	39/144 (27%)
		Skp1	88..156	CDD:279768	34/67 (51%)
SKP1	NP_010615.3	SKP1	3..194	CDD:227528	63/197 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157344319
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.760