Protein Alignment SkpE and AT5G42190

DIOPT Version :10

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_568603.1
• Gene: AT5G42190 / 834224
• AraportID: AT5G42190
• Length: 171
• Species: Arabidopsis thaliana
• Alignment Length: 169
• Identity: 61/169 - (36%)
• Similarity: 91/169 - (53%)
• Gaps: 30/169 - (17%)

  Fly     6 IKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPLHSVSTFTLGKILAWANHHKDDD 70
            |.|:||:|..|..:..||:.|:|||.|::.....|.    :||.:|::..|.|::.:...|.:..
plant     7 ITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNG----IPLPNVTSKILSKVIEYCKRHVEAA 67

  Fly    71 DQS------------------TEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGL 117
            ::|                  :..|:||        .||:.|:.|:..||.::||||..|.||||
plant    68 EKSETTADAAAATTTTTVASGSSDEDLK--------TWDSEFIKVDQGTLFDLILAANYLNIKGL 124

  Fly   118 LELTYNVVANMIRGKTPEEIRFIFNIPEDVSPSVDGELR 156
            |:||...||:||:||||||||..|||..|.:|..:.|:|
plant   125 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVR 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	BTB_POZ_SKP1	5..129	CDD:349631	44/140 (31%)
		Skp1	115..156	CDD:460222	24/40 (60%)
AT5G42190	NP_568603.1	BTB_POZ_SKP1	6..136	CDD:349631	44/140 (31%)
		Skp1	122..169	CDD:460222	25/42 (60%)