Protein Alignment SkpE and SK12

DIOPT Version :10

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_567967.1
• Gene: SK12 / 829598
• AraportID: AT4G34470
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 161
• Identity: 58/161 - (36%)
• Similarity: 86/161 - (53%)
• Gaps: 16/161 - (9%)

  Fly     1 MVTPTIKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPLHSVSTFTLGKILAWANH 65
            |.:..|.|.||:|..|..|..||:.|:||..|::...|.:.    :||.:|.:..|.|::.:...
plant     1 MSSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG----IPLANVESKILVKVIEYCKK 61

  Fly    66 HKDDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIR 130
            :..|:......|:|        :.||..|:.:..:|:.|:||||..|.||.|.:||...||:||:
plant    62 YHVDEANPISEEDL--------NKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIK 118

  Fly   131 GKTPEEIRFIFNIPEDVSP----SVDGELRW 157
            ||||||||..|||..|.:|    :|..|.:|
plant   119 GKTPEEIRSTFNIENDFTPEEEEAVRKENQW 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	BTB_POZ_SKP1	5..129	CDD:349631	39/123 (32%)
		Skp1	115..156	CDD:460222	23/44 (52%)
SK12	NP_567967.1	BTB_POZ_SKP1	5..117	CDD:349631	39/123 (32%)
		Skp1	103..150	CDD:460222	24/47 (51%)