Protein Alignment SkpE and SK11

DIOPT Version :9

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_567959.1
• Gene: SK11 / 829569
• AraportID: AT4G34210
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 161
• Identity: 60/161 - (37%)
• Similarity: 87/161 - (54%)
• Gaps: 16/161 - (9%)

  Fly     1 MVTPTIKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPLHSVSTFTLGKILAWANH 65
            |.:..|.|.||:|..|..|..||:.|:||..|::...|.:.    :||.:|.:..|.|::.:...
plant     1 MSSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG----IPLANVESKILVKVIEYCKK 61

  Fly    66 HKDDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIR 130
            |..|:......|:|        :.||..|:.:..:|:.|:||||..|.||.||:||...||:||:
plant    62 HHVDEANPISEEDL--------NNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIK 118

  Fly   131 GKTPEEIRFIFNIPEDVSP----SVDGELRW 157
            ||||||||..|||..|.:|    :|..|.:|
plant   119 GKTPEEIRSTFNIENDFTPEEEEAVRKENQW 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	SKP1	3..156	CDD:227528	58/156 (37%)
		BTB	6..114	CDD:295341	33/107 (31%)
		Skp1	88..156	CDD:279768	35/71 (49%)
SK11	NP_567959.1	Skp1	3..102	CDD:214704	33/110 (30%)
		SKP1	5..150	CDD:227528	59/157 (38%)
		Skp1	78..150	CDD:279768	36/72 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.890