Protein Alignment SkpE and SK20

DIOPT Version :9

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_001078065.1
• Gene: SK20 / 819203
• AraportID: AT2G45950
• Length: 352
• Species: Arabidopsis thaliana
• Alignment Length: 144
• Identity: 45/144 - (31%)
• Similarity: 72/144 - (50%)
• Gaps: 12/144 - (8%)

  Fly     6 IKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPL-HSVSTFTLGKILAWANHHKDD 69
            |.|::::|.|...|..|||....|...:....|.:.:|..:.| ..|:......||.:...|:
plant    18 IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCRFHQ-- 80

  Fly    70 DDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTP 134
                ..|...|.|:.|     |..|:.:::..|.|:..||..||:|.|::||...:|.:|.||.|
plant    81 ----LPGRSNKERKTY-----DERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNP 136

  Fly   135 EEIRFIFNIPEDVS 148
            ||||.||::|:|::
plant   137 EEIREIFHLPDDLT 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	SKP1	3..156	CDD:227528	45/144 (31%)
		BTB	6..114	CDD:295341	27/108 (25%)
		Skp1	88..156	CDD:279768	25/61 (41%)
SK20	NP_001078065.1	Skp1	15..116	CDD:214704	27/108 (25%)
		Skp1	90..153	CDD:279768	26/66 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910