Protein Alignment SkpE and SK16

DIOPT Version :9

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_565297.1
• Gene: SK16 / 814848
• AraportID: AT2G03190
• Length: 170
• Species: Arabidopsis thaliana
• Alignment Length: 165
• Identity: 51/165 - (30%)
• Similarity: 81/165 - (49%)
• Gaps: 15/165 - (9%)

  Fly     1 MVTPTIKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENA--IVPLHSVSTFTLGKILAWA 63
            |.:..|.|.||:...|..|..||...:.|..|:|      |:.|  .:||.:|:...|..::.:.
plant     1 MSSNKIVLTSSDDESFEVEEAVARKLKVIAHMID------DDCADKAIPLENVTGNILALVIEYC 59

  Fly    64 NHH----KDDDDQSTE--GEELKPRRPYAISPWDAIFLM-VNSTTLLEIILAAKQLQIKGLLELT 121
            ..|    .||.|.|||  .|.:.......:..|||.|:. .:..|::::|||...|.::.||.||
plant    60 KKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLT 124

  Fly   122 YNVVANMIRGKTPEEIRFIFNIPEDVSPSVDGELR 156
            ...||:.::..:|||:|.:|||..|.:|..:..:|
plant   125 CQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIR 159

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	SKP1	3..156	CDD:227528	49/161 (30%)
		BTB	6..114	CDD:295341	34/116 (29%)
		Skp1	88..156	CDD:279768	24/68 (35%)
SK16	NP_565297.1	SKP1	3..165	CDD:227528	50/163 (31%)
		Skp1	3..117	CDD:214704	34/119 (29%)
		Skp1	92..165	CDD:279768	25/68 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	9	8.890