Protein Alignment SkpE and Skp1

DIOPT Version :9

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: XP_038941314.1
• Gene: Skp1 / 287280
• RGDID: 1359648
• Length: 165
• Species: Rattus norvegicus
• Alignment Length: 157
• Identity: 74/157 - (47%)
• Similarity: 99/157 - (63%)
• Gaps: 2/157 - (1%)

  Fly     1 MVTPTIKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQND-ENAIVPLHSVSTFTLGKILAWAN 64
            |..|||||:||:|.||..:|.:|..|.||||||:...:.:: ::..|||.:|:...|.|::.|..
  Rat     1 MQMPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 65

  Fly    65 HHKDDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMI 129
            ||| ||....|.:|.|.:|...|..||..||.|:..||.|:||||..|.|||||::|...|||||
  Rat    66 HHK-DDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 129

  Fly   130 RGKTPEEIRFIFNIPEDVSPSVDGELR 156
            :||||||||..|||..|.:...:.::|
  Rat   130 KGKTPEEIRKTFNIKNDFTEEEEAQVR 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	SKP1	3..156	CDD:227528	72/153 (47%)
		BTB	6..114	CDD:295341	47/108 (44%)
		Skp1	88..156	CDD:279768	36/67 (54%)
Skp1	XP_038941314.1	BTB_POZ_SKP1	5..129	CDD:349631	57/124 (46%)
		Skp1	115..162	CDD:396171	23/42 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166343135
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	9	8.820