Protein Alignment SkpE and skr-6

DIOPT Version :10

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_507574.2
• Gene: skr-6 / 191763
• WormBaseID: WBGene00004812
• Length: 106
• Species: Caenorhabditis elegans
• Alignment Length: 112
• Identity: 34/112 - (30%)
• Similarity: 53/112 - (47%)
• Gaps: 10/112 - (8%)

  Fly    46 VPLHSVSTFTLGKILAWANHHKDDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAK 110
            :||..|......||:.:..|      |.|.    :|.....|..||:.||.::..||.:::|||.
 Worm     4 IPLTKVDAKIFEKIIEYCEH------QGTP----RPLLNGEIGEWDSEFLKLDQNTLFDLVLAAN 58

  Fly   111 QLQIKGLLELTYNVVANMIRGKTPEEIRFIFNIPEDVSPSVDGELRW 157
            .|.|:.|.::|...:|||::..||.:||..|.:....|.:.|....|
 Worm    59 YLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAEDRSDNW 105

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	BTB_POZ_SKP1	5..129	CDD:349631	25/82 (30%)
		Skp1	115..156	CDD:460222	12/40 (30%)
skr-6	NP_507574.2	BTB_POZ	<1..77	CDD:453885	25/82 (30%)
		Skp1	65..>93	CDD:460222	10/27 (37%)