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Protein Alignment SkpE and skr-4
DIOPT Version :9
Sequence 1: | NP_608359.1 |
Gene: | SkpE / 32997 |
FlyBaseID: | FBgn0031074 |
Length: | 167 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_507857.1 |
Gene: | skr-4 / 191762 |
WormBaseID: | WBGene00004810 |
Length: | 159 |
Species: | Caenorhabditis elegans |
Alignment Length: | 138 |
Identity: | 58/138 - (42%) |
Similarity: | 78/138 - (56%) |
Gaps: | 8/138 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 IKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPLHSVSTFTLGKILAWANHHKDDD 70
|||.||:...|....:|...|:||... ..|:.| ||..|::..|.||:.|..||.||:
Worm 10 IKLISSDDKTFTVSRKVISQSKTISGF-------TSEDTI-PLPKVTSAILEKIITWCEHHADDE 66
Fly 71 DQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135
.:..|..|...::...||.|||.|:.|:..||.||||||..|.|:||||:|...||||::||||.
Worm 67 PKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEIILAANYLDIRGLLEVTTQNVANMMKGKTPS 131
Fly 136 EIRFIFNI 143
::|.:|.|
Worm 132 QVRTLFKI 139
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C160160618 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5201 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S272 |
OMA |
1 |
1.010 |
- |
- |
|
QHG54148 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1412723at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000367 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11165 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
9 | 8.770 |
|
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