Protein Alignment SkpE and skr-3

DIOPT Version :10

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_507059.1
• Gene: skr-3 / 180081
• WormBaseID: WBGene00004809
• Length: 167
• Species: Caenorhabditis elegans
• Alignment Length: 146
• Identity: 57/146 - (39%)
• Similarity: 85/146 - (58%)
• Gaps: 7/146 - (4%)

  Fly     6 IKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENA---IVPLHSVSTFTLGKILAWANHHK 67
            |||.||:...|....:|...|:||..::.:..::...:.   .:||..|::..|.||:.|..||.
 Worm    10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITWCEHHA 74

  Fly    68 DDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGK 132
            ||:.:..:    :.::...||.|||.|:.|:..||.||||||..|.|:|||::|...||||::||
 Worm    75 DDEPKKVD----ENKKTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGK 135

  Fly   133 TPEEIRFIFNIPEDVS 148
            ||.:||.:|||..|.|
 Worm   136 TPSQIRTLFNIENDFS 151

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	BTB_POZ_SKP1	5..129	CDD:349631	45/125 (36%)
		Skp1	115..156	CDD:460222	19/34 (56%)
skr-3	NP_507059.1	BTB_POZ_SKP1	10..132	CDD:349631	45/125 (36%)
		Skp1	118..165	CDD:460222	19/34 (56%)