Protein Alignment SkpE and skr-7

DIOPT Version :9

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_504221.1
• Gene: skr-7 / 178840
• WormBaseID: WBGene00004813
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 153
• Identity: 43/153 - (28%)
• Similarity: 79/153 - (51%)
• Gaps: 15/153 - (9%)

  Fly     1 MVTPTI-KLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAI--VPLHSVSTFTLGKILAW 62
            :|.|.: |:|||:|.::.........|.|:..::. ..|.||..::  :|:.:|:...:..::.|
 Worm    17 IVAPIMYKVESSDGQVYEISDEAVKQSNTLSNLIS-TCVANDVASMDPIPITNVTGNIMKMVIEW 80

  Fly    63 ANHHKDD----DDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYN 123
            ...||.:    :|.|.      |:. ..:..||..||.:::..|.::|:|:..|.:.||:.....
 Worm    81 CEKHKGETLPVEDDSV------PKN-ITVPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACK 138

  Fly   124 VVANMIRGKTPEEIRFIFNIPED 146
            :||||..||:|:|:|.:|.||.|
 Worm   139 MVANMAIGKSPDEMRVLFAIPTD 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	SKP1	3..156	CDD:227528	42/151 (28%)
		BTB	6..114	CDD:295341	26/114 (23%)
		Skp1	88..156	CDD:279768	23/59 (39%)
skr-7	NP_504221.1	Skp1	20..129	CDD:214704	27/116 (23%)
		Skp1	103..>160	CDD:279768	21/56 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160620
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.810