Protein Alignment SkpE and skr-9

DIOPT Version :9

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_503043.1
• Gene: skr-9 / 178494
• WormBaseID: WBGene00004815
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 152
• Identity: 41/152 - (26%)
• Similarity: 74/152 - (48%)
• Gaps: 13/152 - (8%)

  Fly     1 MVTPTI-KLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENA-IVPLHSVSTFTLGKILAWA 63
            :|.|.: |:||::|.:|.........|..:..::...|.::..:. .:|:.:|....|..::.|.
 Worm    17 VVAPIMYKVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVIEWC 81

  Fly    64 NHHKDD----DDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNV 124
            ..||.:    :|.|.      |:. ..:..||..||.:::..|.::|:|...|.:.||:.....:
 Worm    82 EKHKGEALPVEDDSV------PKH-VNVPEWDTNFLKIDNDVLFDLIVACNYLDVPGLMNYGCKI 139

  Fly   125 VANMIRGKTPEEIRFIFNIPED 146
            ||.|..||:|:|:|.||.||.|
 Worm   140 VAMMAIGKSPDELRIIFAIPTD 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	SKP1	3..156	CDD:227528	40/150 (27%)
		BTB	6..114	CDD:295341	24/113 (21%)
		Skp1	88..156	CDD:279768	23/59 (39%)
skr-9	NP_503043.1	Skp1	20..129	CDD:214704	25/115 (22%)
		Skp1	103..>161	CDD:279768	22/57 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160609
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.810