Protein Alignment SkpE and skr-10

DIOPT Version :9

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_502902.1
• Gene: skr-10 / 178447
• WormBaseID: WBGene00004816
• Length: 192
• Species: Caenorhabditis elegans
• Alignment Length: 145
• Identity: 41/145 - (28%)
• Similarity: 72/145 - (49%)
• Gaps: 12/145 - (8%)

  Fly     7 KLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENA-IVPLHSVSTFTLGKILAWANHHKDD- 69
            |:||::|.:|.........|.|:..::...|.::..:. .:|:.:|:...|..::.|...||.:
 Worm    22 KVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKHKGEA 86

  Fly    70 ---DDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRG 131
               ||.|.      |:. ..:..||..||.:::..|.::|:|...|.:.||:.....:||.|..|
 Worm    87 LPVDDDSV------PKH-ITVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVAMMAIG 144

  Fly   132 KTPEEIRFIFNIPED 146
            |:|:|:|.||.||.|
 Worm   145 KSPDELRIIFAIPTD 159

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	SKP1	3..156	CDD:227528	41/145 (28%)
		BTB	6..114	CDD:295341	26/111 (23%)
		Skp1	88..156	CDD:279768	23/59 (39%)
skr-10	NP_502902.1	Skp1	18..127	CDD:214704	26/111 (23%)
		Skp1	101..>159	CDD:279768	22/57 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160607
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.860