Protein Alignment SkpE and skr-17

DIOPT Version :10

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_001379551.1
• Gene: skr-17 / 174257
• WormBaseID: WBGene00004823
• Length: 180
• Species: Caenorhabditis elegans
• Alignment Length: 158
• Identity: 47/158 - (29%)
• Similarity: 76/158 - (48%)
• Gaps: 6/158 - (3%)

  Fly     6 IKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQND---ENAIVPLHSVSTFTLGKILAWANHHK 67
            ::|.||:|.:...::|..::|.|:...:.......:   |...||:::|..|||..::.|.:.||
 Worm    25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEWCDKHK 89

  Fly    68 DDDDQSTEGEELKPRRPYAISPWDAIFL-MVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRG 131
            :||......|  |.::...|..||..|| .:..:.|.::|.||..|.:.||:......|||..:|
 Worm    90 EDDPAIALAE--KDKKNICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGCKTVANSAKG 152

  Fly   132 KTPEEIRFIFNIPEDVSPSVDGELRWKD 159
            |..||:|.:|.|||...........|.|
 Worm   153 KNAEEMRELFGIPEPWEQPSTSTATWDD 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	BTB_POZ_SKP1	5..129	CDD:349631	36/126 (29%)
		Skp1	115..156	CDD:460222	14/40 (35%)
skr-17	NP_001379551.1	BTB_POZ_SKP1	24..150	CDD:349631	36/126 (29%)
		Skp1	137..>166	CDD:460222	12/28 (43%)