Protein Alignment SkpE and skr-15

DIOPT Version :9

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_494662.1
• Gene: skr-15 / 173729
• WormBaseID: WBGene00004821
• Length: 184
• Species: Caenorhabditis elegans
• Alignment Length: 149
• Identity: 38/149 - (25%)
• Similarity: 71/149 - (47%)
• Gaps: 10/149 - (6%)

  Fly     3 TPTI--KLESSEGVIFPTEVRVAMVSETIKTMLDH--FAVQNDENAI-VPLHSVSTFTLGKILAW 62
            ||.:  .:||::.|:.....:....|.|:...:.:  ::.:|.|:.: :|:..|:..||..::.|
 Worm    16 TPVVYYSIESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEW 80

  Fly    63 ANHHKDDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVAN 127
            ..|||.|     ...|..|.....:..||..|:.:....|.:::.|:..|::..||......:|.
 Worm    81 CEHHKAD-----PVPEAYPSGNTVLPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFIAG 140

  Fly   128 MIRGKTPEEIRFIFNIPED 146
            :.:|.:|||:|..|.||.|
 Worm   141 LAKGMSPEEMRVFFCIPTD 159

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	SKP1	3..156	CDD:227528	38/149 (26%)
		BTB	6..114	CDD:295341	24/112 (21%)
		Skp1	88..156	CDD:279768	18/59 (31%)
skr-15	NP_494662.1	Skp1	20..127	CDD:214704	24/111 (22%)
		SKP1	23..176	CDD:227528	36/142 (25%)
		Skp1	101..167	CDD:279768	18/59 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160615
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.860