Protein Alignment SkpE and skr-1

DIOPT Version :10

• Sequence 1: NP_608359.1
• Gene: SkpE / 32997
• FlyBaseID: FBgn0031074
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_492513.1
• Gene: skr-1 / 172775
• WormBaseID: WBGene00004807
• Length: 176
• Species: Caenorhabditis elegans
• Alignment Length: 154
• Identity: 66/154 - (42%)
• Similarity: 93/154 - (60%)
• Gaps: 4/154 - (2%)

  Fly     6 IKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDE--NA-IVPLHSVSTFTLGKILAWANHHK 67
            ||:.||:..||.....|..:|.||.|:|....:.::|  || .:|:.:|:...|.|:::|.|||
 Worm    16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHH- 79

  Fly    68 DDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGK 132
            ..|..|||..:.:.:|...|..||..||.|:..||.|:||||..|.|||||::|...|||||:||
 Worm    80 HSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 144

  Fly   133 TPEEIRFIFNIPEDVSPSVDGELR 156
            :|||||..|||..|.:|..:.::|
 Worm   145 SPEEIRRTFNIKNDFTPEEEEQIR 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpE	NP_608359.1	BTB_POZ_SKP1	5..129	CDD:349631	51/125 (41%)
		Skp1	115..156	CDD:460222	22/40 (55%)
skr-1	NP_492513.1	BTB_POZ_SKP1	16..141	CDD:349631	51/125 (41%)
		Skp1	127..174	CDD:460222	23/42 (55%)