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Protein Alignment SkpE and C42D4.18
DIOPT Version :9
Sequence 1: | NP_608359.1 |
Gene: | SkpE / 32997 |
FlyBaseID: | FBgn0031074 |
Length: | 167 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001255289.1 |
Gene: | C42D4.18 / 13196550 |
WormBaseID: | WBGene00206380 |
Length: | 168 |
Species: | Caenorhabditis elegans |
Alignment Length: | 90 |
Identity: | 17/90 - (18%) |
Similarity: | 34/90 - (37%) |
Gaps: | 25/90 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 VTPTIKLESSEGVIFPTEV-RVAMVSETIKTMLDHFAV---------------QNDENAIVPLHS 50
:|.:.|.....|::.|.|: |...:.|.:| |.: :.:|..|..|
Worm 15 LTESRKQMEKAGLLSPQELSRKICIEEQMK-----FEIAECLRKAQEKADEKKRENEKVIGQL-- 72
Fly 51 VSTFTLGKILAWANHHKDDDDQSTE 75
|:.|.:.:...|..|::::...|
Worm 73 --TYRLERKIREMNRLKEEEEYMEE 95
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SkpE | NP_608359.1 |
SKP1 |
3..156 |
CDD:227528 |
17/89 (19%) |
BTB |
6..114 |
CDD:295341 |
16/86 (19%) |
Skp1 |
88..156 |
CDD:279768 |
|
C42D4.18 | NP_001255289.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5201 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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