Protein Alignment SkpC and SKP1

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_010615.3
• Gene: SKP1 / 851928
• SGDID: S000002736
• Length: 194
• Species: Saccharomyces cerevisiae
• Alignment Length: 113
• Identity: 51/113 - (45%)
• Similarity: 73/113 - (64%)
• Gaps: 7/113 - (6%)

  Fly    39 ENDENAIVPLPKVNAFILSKILTWIYHHKDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLF 103
            |:|:..::|:|.|.:.:|.|::.|..||:|.:....:..:....:|  :.:||..|:.|||..|:
Yeast    70 EDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAP--VDSWDREFLKVDQEMLY 132

  Fly   104 EIILAANYLEIKGLVDLCCKTVANMIRGKTPEEIRHTFNI-----PDE 146
            |||||||||.||.|:|..||.||.||||::|||||.||||     |:|
Yeast   133 EIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEE 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	36/89 (40%)
		Skp1	115..>146	CDD:460222	21/35 (60%)
SKP1	NP_010615.3	SKP1	3..194	CDD:227528	51/113 (45%)