Protein Alignment SkpC and SK4

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_564105.1
• Gene: SK4 / 838604
• AraportID: AT1G20140
• Length: 163
• Species: Arabidopsis thaliana
• Alignment Length: 159
• Identity: 70/159 - (44%)
• Similarity: 91/159 - (57%)
• Gaps: 22/159 - (13%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYHH---- 66
            |.|:||||..|..|...|..|:|||.|:|....:|.    :|||.|...||:|::.:...|
plant     8 IILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNG----IPLPNVTGAILAKVIEYCKKHVEAA 68

  Fly    67 ----KDDDAHG-AEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVA 126
                .|.|.:| ||..||        ..||:.|:.|||||||::|||||||.|.||:||.||.||
plant    69 AEAGGDKDFYGSAENDEL--------KNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVA 125

  Fly   127 NMIRGKTPEEIRHTFNIP-DEIPSRTAQL 154
            :.:||||||::|..|||. |..|...|::
plant   126 DQMRGKTPEQMRAHFNIKNDYTPEEEAEV 154

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	48/116 (41%)
		Skp1	88..>146	CDD:279768	36/58 (62%)
SK4	NP_564105.1	BTB_POZ_SKP1	7..128	CDD:349631	57/131 (44%)
		Skp1	115..161	CDD:396171	21/40 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		mtm992
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	10	10.030