Protein Alignment SkpC and SK12

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_567967.1
• Gene: SK12 / 829598
• AraportID: AT4G34470
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 146
• Identity: 64/146 - (43%)
• Similarity: 89/146 - (60%)
• Gaps: 12/146 - (8%)

  Fly     1 MDAPTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYH 65
            |.:..|.|.||||..|..|...|..|:||..|:|...|.:.    :||..|.:.||.|::.:...
plant     1 MSSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG----IPLANVESKILVKVIEYCKK 61

  Fly    66 HKDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIR 130
            :..|:|        :|.|..|::.||..|::::|.|:||:|||||||.||.|.||.|:|||:||:
plant    62 YHVDEA--------NPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIK 118

  Fly   131 GKTPEEIRHTFNIPDE 146
            ||||||||.||||.::
plant   119 GKTPEEIRSTFNIEND 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	40/107 (37%)
		Skp1	88..>146	CDD:279768	37/57 (65%)
SK12	NP_567967.1	Skp1	3..102	CDD:214704	40/110 (36%)
		SKP1	5..150	CDD:227528	63/142 (44%)
		Skp1	77..150	CDD:279768	37/58 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		mtm992
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	11	10.940