Protein Alignment SkpC and SK8

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_566692.1
• Gene: SK8 / 821737
• AraportID: AT3G21830
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 155
• Identity: 50/155 - (32%)
• Similarity: 82/155 - (52%)
• Gaps: 13/155 - (8%)

  Fly     1 MDAPTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYH 65
            |....|.|:||:|..|..|...|:..:||..|:|....:|    ::.:.|:.:.||..::.:...
plant     1 MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDN----VILVLKMTSEILEMVIEYCNK 61

  Fly    66 HKDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIR 130
            |..|.|        :|.|..|:..||..|:..|:.|:|.:..|||:|..|.|:.|..:|||:||:
plant    62 HHVDAA--------NPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIK 118

  Fly   131 GKTPEEIRHTFNIPDEI-PSRTAQL 154
            |.||:::|..|||.::: |...|.:
plant   119 GNTPKQMREFFNIENDLTPEEEAAI 143

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	38/123 (31%)
		Skp1	115..>146	CDD:460222	15/30 (50%)
SK8	NP_566692.1	BTB_POZ_SKP1	5..117	CDD:349631	38/123 (31%)
		Skp1	103..150	CDD:460222	17/41 (41%)