Protein Alignment SkpC and SK3

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_565604.1
• Gene: SK3 / 817111
• AraportID: AT2G25700
• Length: 163
• Species: Arabidopsis thaliana
• Alignment Length: 158
• Identity: 64/158 - (40%)
• Similarity: 89/158 - (56%)
• Gaps: 20/158 - (12%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYHH---- 66
            |.|:||||..|..|...|..|:|||.|:|...|:|.    :|||.|...||:|::.:...|
plant     8 IILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNG----IPLPNVTGAILAKVIEYCKKHVEAA 68

  Fly    67 ----KDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVAN 127
                .|.|.:|:       ...|::..||.:|:.||.||||:::.|||||.|.||:||.||.||:
plant    69 AEAGGDKDFYGS-------TENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVAD 126

  Fly   128 MIRGKTPEEIRHTFNIP-DEIPSRTAQL 154
            .:|||||.::|..|||. |..|...|::
plant   127 QMRGKTPAQMREHFNIKNDYTPEEEAEV 154

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	52/130 (40%)
		Skp1	115..>146	CDD:460222	17/31 (55%)
SK3	NP_565604.1	BTB_POZ_SKP1	7..128	CDD:349631	52/130 (40%)
		Skp1	115..161	CDD:460222	20/40 (50%)